| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1269 |
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| Symbol | |
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| ID | 4450655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | + |
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| Start bp | 1400013 |
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| End bp | 1401659 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639693305 |
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| Product | hypothetical protein |
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| Protein accession | YP_834914 |
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| Protein GI | 116689291 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4670] Acyl CoA:acetate/3-ketoacid CoA transferase |
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| TIGRFAM ID | [TIGR01110] malonate decarboxylase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0070497 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGGAT GGAATCACGC GCGGCAGGCG CGCGATGCAC GCCTCGCGGC CGGCGCGGCA
TACGCGCAGG GCAAGCGGGT CGATGCGCGC GACACCGTCG CGTTGCTCGA AGCGGTGCTG
CGGCCCGGCG ATCGCGTGTG CCTCGAAGGC GACAACCAGA AGCAGGCCGA TCTGCTCGCC
ACCGCGCTCG CCGACGTCGA CAGCGCGAAG ATCCACGACC TGCACATGGT GCAGTCGGGC
GTCGTGCTGC CCGAGCATCT CGACGTGTTC GAGCGCGGCA TCGCGAAGCG GCTCGACTTC
GCGTATTCGG GCCCGCAGTC GCAGCGCATC GCGAAGCTGC TGTTCGGCGG CAAGATCGCG
CTCGGCGCGG TGCATACCTA TCTCGAGCTG TTCGCCCGCT ACTTCATCGA CCTCACGCCG
CAGGTCGCGC TGATCGCGGC CGTGAGCGCC GATCGCGACG GCAACCTGTA CACCGGCCCG
AACACCGAGG ACACGCCGAC CGTCGTCGAA GCGACCGCCT TCAAGGACGG CATCGTGATC
GCGCAGGTCG ACCGCATCGT CGACAAGGTG CCGCGCGTCG ACATTCCGGG CGATCGCGTG
CATTTCGTCG TCGAGGCCGG CCGGCCGTTC TACGTCGAGC CGCTGTTCAC GCGCGATCCG
GCCGCGATCA CCGAAACGCA GATCCTCACC GCGATGCTCG CGATCAAGGG CATCTACGAA
CCGTACGGGA TCAAGCGTCT GAACCACGGA ATCGGCTTCA ACACGGCCGC GATCGAGCTG
CTGCTGCCGA CCTACGGCGC GAAGCTCGGG CTGAAGGGCA AGGTCTGCAC GCACTGGGCG
CTCAATCCGC ACCCGACGCT GATCCCCGCG ATCGAATTGG GGTGGGTCGA GCAGGTCCAC
TGCTTCGGCT CCGAGGTCGG GATGGACGAC TACATCCGCG CGCGCTCCGA CGTGTGGTTC
ACGGGCCCCG ACGGGTCGCT GCGCTCGAAC CGGGCGTTCT GCCAGACGGC CGGCCTCTAT
GCATGCGACA TGTTCATCGG CTCGACGCTG CAGATCGACC TGTCCGGCCA TTCGTCGACG
GTCACGGCCG AGCGGATCGC CGGCTTCGGC GGCGCGCCGA ACATGGGCAG CGACGCGCGC
GGCCGGCGCC ATCCGAGCGA GCCGTGGCTG AAGGCCGGCG CGGAAGCCGA CCCCGACACG
CCGGCGGCGC TGCGGCGCGG CCGCAAGCTG GTCGTGCAGA TCGGCGAGAC GTTCGGCGAC
AAGAACGTGC CGATGTTCGT CGAGAAGCTC GACGCGCTGA AGCTCGCCGA CAAGCTGCAG
CTCGACCTCG CGCCGATCAT GGTCTACGGC GACGACGTCA CGCACATCGT CACCGAGGAA
GGGATCGCGA ACCTGCTGAT GTGCCGCGAC AAGGACGAAC GCGAGCACGC GATTCGCGGC
GTCGCCGGCT ATACCGACGT CGGCCGCGGC CGCGACAAGA AGCTGGTCGA GCGGCTGCGC
GAACGCGGCG TGATCCGTCG CCCGGAGGAT CTCGGTATCG ATCCGCTCGA CGCCGACCGC
CGCTGGCTCG CCGCGCGGTC GATCAAGGAT CTGGTGCACT GGTCGGGCGG GCTCTATGCG
CCGCCGGCCC GGTTCCGCAA CTGGTGA
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| Protein sequence | MTGWNHARQA RDARLAAGAA YAQGKRVDAR DTVALLEAVL RPGDRVCLEG DNQKQADLLA
TALADVDSAK IHDLHMVQSG VVLPEHLDVF ERGIAKRLDF AYSGPQSQRI AKLLFGGKIA
LGAVHTYLEL FARYFIDLTP QVALIAAVSA DRDGNLYTGP NTEDTPTVVE ATAFKDGIVI
AQVDRIVDKV PRVDIPGDRV HFVVEAGRPF YVEPLFTRDP AAITETQILT AMLAIKGIYE
PYGIKRLNHG IGFNTAAIEL LLPTYGAKLG LKGKVCTHWA LNPHPTLIPA IELGWVEQVH
CFGSEVGMDD YIRARSDVWF TGPDGSLRSN RAFCQTAGLY ACDMFIGSTL QIDLSGHSST
VTAERIAGFG GAPNMGSDAR GRRHPSEPWL KAGAEADPDT PAALRRGRKL VVQIGETFGD
KNVPMFVEKL DALKLADKLQ LDLAPIMVYG DDVTHIVTEE GIANLLMCRD KDEREHAIRG
VAGYTDVGRG RDKKLVERLR ERGVIRRPED LGIDPLDADR RWLAARSIKD LVHWSGGLYA
PPARFRNW
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