| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1228 |
|---|
| Symbol | |
|---|
| ID | 4450122 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 1357927 |
|---|
| End bp | 1359129 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639693264 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_834873 |
|---|
| Protein GI | 116689250 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.881059 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCGC TCGACCGCCT CCTCGATTTC CTCGCCCGCT TTTCGTTCCG GATTCGCCTG
CCGCAAAGCC GCGGCGGCCG CGTGGCGCTG GCGCTCGTCT TCATCTATTT CGTCTGGGGT
TCGACCTACA GCGGGCTGCA TTTCGCGCTG CAGTCGTTCC CGCCGCTGCT GCTGTCGGGG
TTGCGCAACC TGCTCGGCGG GATCGGCCTG TTCATCTTCG CGTTGCGGCG CAAGCCCGAA
TGGCCGACGC TGCTGGAAAT CCGCAACTCG GCGATCGTCG GCACGATGCT CGTCGCGCTG
TCGTCCGGCA CGATCGCGCT CGGCATGCGC ACCGTCAGCA GCGGTTCGGC CGCGGTGATG
GTGGCCACGG TGCCGCTGTT CGCGACCGTG ATCGCGGCGG TGGCCGGGCG GCCGGTGACG
AAGGGTGAAT GGGCGGCCGT CGCGCTCGGG ATGGTCGGCA TCGTCGTGCT GAATTCGGGC
GGCGCGGCCG CCGCGAACTC GGCGCTCGGC ACGATCTGCG TGCTGGCCGG CGCGCTGTTC
TGGGCGGGCG GCGCGCATCT CGCGACACGG CTCAAGCTGC CGTCCGACCT GTTCCTGTCG
ACGTCGCTGC AGATCGGCCT GGGCGGCCTG ATGTCGACGA TCGTCGCGTG GCTGCTCGGC
GAACGCGTCG AACAGCTGGC CGTCGGGTCC GTGTTCGCGT TCGTGTACCT GATGGTGTTC
TGCACGATGG CCGCGTACGT CGCGTACGGC TACCTGATCC GCCACACGAG CCCGATCATC
GCGAGCAGCT GCATGTACGT GAACCCGATC GTCGCGGTCG CGCTCGGTGC GTTGTTGCTG
GGCGAACCGG TGACGATGGC GACCGTGGTC GCGACCGTCG CGATCCTCGG CAGCGTCGGG
TTGTCGTTCG TGTTCGATCC GGCGCGCCGG CCCGCGGCGG CTACGGCCAC CGCTCCGGCT
CAGGCTACCG CTGCCAGTTC GCCGGTCGTG GCGGCCGAGC AGGCGGTGAC GGCGGACGCT
TCGCCCGTCG TCGAGCAGAT CGCGACGCCG GATGCGCCGC CCATCCTCGC GCCTTCCGCC
GTCCCGCTCG CGGTGCCGGC GCCTGCGGCC GTGATGGACC CGGCCGCGGT GATCGAGCCC
GCCCCGGCGT TCGCGACGCC GCCCGCCGCT ACCGAGCCGG CCGTTTCGCG CACCGACGCG
TGA
|
|---|
| Protein sequence | MTPLDRLLDF LARFSFRIRL PQSRGGRVAL ALVFIYFVWG STYSGLHFAL QSFPPLLLSG
LRNLLGGIGL FIFALRRKPE WPTLLEIRNS AIVGTMLVAL SSGTIALGMR TVSSGSAAVM
VATVPLFATV IAAVAGRPVT KGEWAAVALG MVGIVVLNSG GAAAANSALG TICVLAGALF
WAGGAHLATR LKLPSDLFLS TSLQIGLGGL MSTIVAWLLG ERVEQLAVGS VFAFVYLMVF
CTMAAYVAYG YLIRHTSPII ASSCMYVNPI VAVALGALLL GEPVTMATVV ATVAILGSVG
LSFVFDPARR PAAATATAPA QATAASSPVV AAEQAVTADA SPVVEQIATP DAPPILAPSA
VPLAVPAPAA VMDPAAVIEP APAFATPPAA TEPAVSRTDA
|
|---|
| |