Gene Bcen2424_1047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_1047 
SymbolrpsA 
ID4451092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp1161351 
End bp1163081 
Gene Length1731 bp 
Protein Length576 aa 
Translation table11 
GC content60% 
IMG OID639693078 
Product30S ribosomal protein S1 
Protein accessionYP_834693 
Protein GI116689070 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0539] Ribosomal protein S1 
TIGRFAM ID[TIGR00717] ribosomal protein S1 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACAATC AGATTTTTAT GTCCGACCTG CAAACCTCCA CCCCGAATAC CGAATCCTTT 
GCGGCTCTGT TCGAAGAGTC GCTGACCCGC CAAGACATGC GCGCCGGCGA AGTGATTTCC
GCCGAAGTCG TGCGCGTCGA CCACAACTTC GTGGTCGTCA ATGCAGGCCT GAAGTCCGAG
GCTTACATTC CGATCGAGGA ATTCCTGAAC GATCAGGGCG AGGTTGAGGT GCAGTCGGGC
GATTTCGTGT CCGTCGCGAT CGACGCACTC GAAAACGGCT ATGGCGACAC GATCCTGTCG
CGCGACAAGG CGAAGCGCCT TGCATCGTGG CTGTCGCTGG AAAAGGCGCT CGACAACAAC
GAGCTCGTCA CCGGCACGAT CACCGGCAAG GTGAAGGGCG GCATGACCGT GATGGTCAAC
GGCATCCGCG CGTTCCTGCC GGGTTCGCTG GTCGACACGC GTCCGGTCAA GGACACGACC
CCGTACGAAG GCAAGACGCT CGAGTTCCGC GTGATCAAGC TCGATCGCAA GCGTAACAAC
GTCGTGCTGT CGCGTCGTGC AGTGATCGAA GCAACGCAAG GCGAAGAGCG CGCGAAGCTG
CTCGAGACGC TGAAGGAAGG CGCGATCGTC AACGGCGTGG TCAAGAACAT CACCGACTAC
GGCGCGTTCG TCGACCTCGG CGGTATCGAC GGCCTGCTGC ACATCACCGA CATCGCATGG
CGTCGTGTGC GTCACCCGAG CGAAGTCCTG TCGGTTGGCC AGGAAGTCAC CGCGAAGATC
CTCAAGTTCG ACCAAGAGAA GAACCGCGTC TCGCTGGGCA TCAAGCAACT GGGCGACGAT
CCGTGGGAAG GCATCTCGCG CCGTTACCCG TCGGGCACGC GCCTGTTCGG CAAGGTCACG
AACATCACCG ACTACGGCGC ATTCGTCGAA GTGGAATCGG GCATCGAAGG CCTCGTCCAC
GTGTCGGAAA TGGACTGGAC CAACAAGAAC GTTGCGCCGT CGAAGGTTGT CCAGCTGGGC
GACGAAGTCG AAGTCATGGT CCTCGAGATC GACGAAGACC GTCGTCGTAT CAGCCTCGGC
ATGAAGCAGT GCAAGCCGAA TCCGTGGGAT GACTTCAGCC GCAACTTCAA GAAGGGCGAC
AAGATCACGG GCGCAATCAA GTCGATCACC GACTTCGGCG TGTTCATCGG TCTGCCGGGC
GGCATCGACG GCTTGGTCCA CCTGTCGGAC CTGTCGTGGA GCGAAGCCGG CGAAGAAGCC
GTTCGCAAGT ACAAGAAGGG CGACGAAGTC GAAGCAATCG TGCTCGGTAT CGACGTCGAG
AAGGAGCGCA TTTCGCTCGG CATCAAGCAG CTCGAAGGCG ACCCGTTCAG CAACTACGTT
GCAATGAACG ACAAGGGCTC GATCGTCGAC GGCGTCGTGA AGACGGTCGA TGCGAAGGGT
GCGGTCGTCA CGCTGACGGG CGACATCGAA GGCTACCTGC GTGCGTCGGA AATCTCGCAG
GATCGCGTCG AAGATGCACG CAACGTGCTG AAGGAAGGCG ACAAGGTCAA CGCGATGGTG
ATCAACATCG ATCGCAAGTC GCGCGGCATC AACCTGTCGA TCAAGGCGAA GGATTCGGCC
GAACAACAGG AAGCGATCCG CGGCCTGCAG TCGGACTCCA GCGCTGCTGC GACCGGTACG
ACCAACCTCG GCGCGCTGCT GAAGGCGAAG CTCGACGGCC AGAACCAGTA A
 
Protein sequence
MHNQIFMSDL QTSTPNTESF AALFEESLTR QDMRAGEVIS AEVVRVDHNF VVVNAGLKSE 
AYIPIEEFLN DQGEVEVQSG DFVSVAIDAL ENGYGDTILS RDKAKRLASW LSLEKALDNN
ELVTGTITGK VKGGMTVMVN GIRAFLPGSL VDTRPVKDTT PYEGKTLEFR VIKLDRKRNN
VVLSRRAVIE ATQGEERAKL LETLKEGAIV NGVVKNITDY GAFVDLGGID GLLHITDIAW
RRVRHPSEVL SVGQEVTAKI LKFDQEKNRV SLGIKQLGDD PWEGISRRYP SGTRLFGKVT
NITDYGAFVE VESGIEGLVH VSEMDWTNKN VAPSKVVQLG DEVEVMVLEI DEDRRRISLG
MKQCKPNPWD DFSRNFKKGD KITGAIKSIT DFGVFIGLPG GIDGLVHLSD LSWSEAGEEA
VRKYKKGDEV EAIVLGIDVE KERISLGIKQ LEGDPFSNYV AMNDKGSIVD GVVKTVDAKG
AVVTLTGDIE GYLRASEISQ DRVEDARNVL KEGDKVNAMV INIDRKSRGI NLSIKAKDSA
EQQEAIRGLQ SDSSAAATGT TNLGALLKAK LDGQNQ