Gene Bcen2424_0878 details

Gene Information

• Locus tag: Bcen2424_0878
• ID: 4448437
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia HI2424
• Kingdom: Bacteria
• Replicon accession: NC_008542
• Strand: +
• Start bp: 980850
• End bp: 982727
• Gene Length: 1878 bp
• Protein Length: 625 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 639692902
• Product: glycosyl transferase family protein
• Protein accession: YP_834524
• Protein GI: 116688901
• COG category: [M] Cell wall/membrane/envelope biogenesis; [R] General function prediction only
• COG ID: [COG0463] Glycosyltransferases involved in cell wall biogenesis; [COG1216] Predicted glycosyltransferases

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGTTGC GCAAAGCACG CTCGTTCGTG AACCGGGTGG CGGGTGACGG TGGATTGCGA 
CTGGTCGTGC GCAAGGCTTA CGGTATCTTC CGCCGGGAAG GAGTTGCCGG CATCAGAAGC 
CGGATCGCAT GGTTGCGCGC GGGCGCGCCG GGTGTCATCG ATCCGGTTCT CTATGCAGAA 
TGGGTTCGCC GTTACGATCA GGTTGACGAC GCAACGCGCG CGGCCATTCG CGAGCGTATC 
GCCGATTTCG CGAATCCGCC GCTGATTTCA GTGGTGATGC CCGTCTACAA TCCCGATCCC 
GCTTGGCTGG CGGAGGCGAT CGAGTCCATC CGCGGACAAC TTTATCCGCA TTGGGAACTC 
TGCATTGCCG ACGACGTGTC GACGAATCCG GCCATCCGCC CGCTGCTCGA ACGTTACGCC 
GCCCAGGACC CGCGGATCAA GGTCGCGTTC CGGCAGAAGA ACGGCCATAT TTCTGCCGCA 
TCGAATACTG CGCTCGAACT CGTGACGGGC ACGTGGGTCG CGCTGTTCGA TCACGACGAC 
CTGTTGCCGG AGCAGGCGCT TTATTGCGTC GCGGATGTGA TCGTGCGCGA TCCGTCGATT 
CGAATGATCT ATTCTGATGA AGACAAGATC GATGGCTCGG GCAAGCGCCG TGAACCGTAC 
TTCAAGTGCG ACTGGAATCC CGATCTGTTC CTTTCACAGA ACATGTTCAG TCATCTGGGC 
GTGTTTCAAA AGGCGCTGCT CGACGAAGTC GGCGGTTTCC GCGAGGGGTA TGAGGGGTCT 
CAGGACTATG ATCTGGCCCT TCGCTGTGTC GAGCGTGCGG GCGCGGCTGC AATTCATCAC 
ATTCCACGGG TGCTGTATCA CTGGCGGGTT CATGCTGAAA GCACCTCGTC GGGGACCGAC 
GCCAAGCCCT ACGCGGTAGT GGCCGGTGAG CGGGCGCTCA ACGACCACTT CGAGCGAACG 
GGTGTCCGCG GTGTGGCGGA GTATGCAGGA AACGGCTACC GTGCGCGGTA TGCGTTGCCG 
GATCCGGCGC CGCTCGTCAG CCTGATCATC CCGACCCGAA ACGGGCTGAA CCTGATTCGG 
CAGTGCATCA CGAGCATTGT TGGCAAGACG ACGTACGCAC GCTACGAAAT CATCATCGTC 
GACAACGGCT CGGATGATCC GGACACACTG AATTACCTCG CGTCGCTCGA GAACGACGTG 
CGTTTCCGGA TATTGCGCGA CGATCGGCCG TTCAATTTCG CGGCGTTGTG CAATGCGGCG 
GTCGAGGTGG CAAGTGGCGA GGTCGTCGGA CTGGTCAACA ACGATATCGA GGTGATTTCT 
CCCGATTGGT TGACGGAAAT GGTCAGTATT GCATTGCAAC CGGGCGTCGG CGCGGTGGGC 
GCGAAACTGC TCTATCCGAA CGACACGGTC CAGCATGCCG GCGTGGTGCT GGGGCTTGGC 
GGCGTGGCGG GACATGTACA CAAACACATT CCTCGCGGAT CGTTCGGGTA CTTCGGTCGC 
GCCAGCCTGA TCGGCGCCTT CTCCGCAGTG ACCGCTGCAT GCATGATCGT GCGCAAGGCT 
GCCTATCGCG AAGTGGCTGG AATGAACGAA CGGGATCTGG GTGTCGCGTT CAACGATATC 
GATTTCTGTC TTCGCTTGTT GAAGGCCGGC TATCGCAATG TCTGGACGCC GTATGCGGAG 
CTGTATCACC ATGAGTCGGC GACGCGTGGT TACGAGGACG ATCCTGTCAA ACAGGCTCGA 
TTCGACGGCG AGACCGAGTA CATGCAAAAG CACTGGGGAG AGCTGCTGCG GAATGATTCC 
TCATACAGTC CAAATCTGAC GTTGAACGAA GAGGATATCG GTCTGGCCTG GCCGTCACGG 
GTGGGCGCGC TCGTCTGA 

 

Protein sequence

MKLRKARSFV NRVAGDGGLR LVVRKAYGIF RREGVAGIRS RIAWLRAGAP GVIDPVLYAE 
WVRRYDQVDD ATRAAIRERI ADFANPPLIS VVMPVYNPDP AWLAEAIESI RGQLYPHWEL 
CIADDVSTNP AIRPLLERYA AQDPRIKVAF RQKNGHISAA SNTALELVTG TWVALFDHDD 
LLPEQALYCV ADVIVRDPSI RMIYSDEDKI DGSGKRREPY FKCDWNPDLF LSQNMFSHLG 
VFQKALLDEV GGFREGYEGS QDYDLALRCV ERAGAAAIHH IPRVLYHWRV HAESTSSGTD 
AKPYAVVAGE RALNDHFERT GVRGVAEYAG NGYRARYALP DPAPLVSLII PTRNGLNLIR 
QCITSIVGKT TYARYEIIIV DNGSDDPDTL NYLASLENDV RFRILRDDRP FNFAALCNAA 
VEVASGEVVG LVNNDIEVIS PDWLTEMVSI ALQPGVGAVG AKLLYPNDTV QHAGVVLGLG 
GVAGHVHKHI PRGSFGYFGR ASLIGAFSAV TAACMIVRKA AYREVAGMNE RDLGVAFNDI 
DFCLRLLKAG YRNVWTPYAE LYHHESATRG YEDDPVKQAR FDGETEYMQK HWGELLRNDS 
SYSPNLTLNE EDIGLAWPSR VGALV