Gene Bcen2424_0643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_0643 
Symbol 
ID4450433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp716165 
End bp717322 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content71% 
IMG OID639692666 
Productmajor facilitator transporter 
Protein accessionYP_834289 
Protein GI116688666 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCTGC TGTTCGCGTG CGCGTGCGGC ATCGTCATCG GCAACATCTA CTACGCGCAG 
CCGCTGCTCG CCGCGATCGC GCACAGCTTC GGCCGCGCGC CGACCGAACT CGGCTATCTC
GTCACGCTGA CGCAGCTCGG CTATGCGGCC AGCCTGCTGC TGATCGTGCC GCTCGGCGAT
GCGGTCAACC GCCATACGCT GATCGTGCGG CTGCTGATGC TCAACGTCGT CGCGCTGGTC
GCGGTCACGT TCAGCACCAA CTTCACGATG TTCGTCGTCG CGAACGTCGC GGTCGGCTTC
GTCACCTGTT CGACGCAGCT GCTCGTGCCG TTCGCGGCGT CGCTCGCCGA TGCGCGCTCG
CGCGGCCGCG CGGTCGGCAC CGTGATGAGC GGGCTCCTGC TCGGCATCCT GCTCGCGCGC
GTCGCGGCCG GCGCGATCGC CGACGGGTTC GGCTGGCGCG CGGTGTACGG CATCGCCGCG
GCGATGGTGC TCGCGCTGAC CGTCGTGCTC GCCGTGAAGC TGCCGAAGGA TCGCCGCGAC
GCGCGCGTCG ACTATCCGGC GCTGATGACC TCGCTCGTCG CGCTGGTGCG CGCGCAGCCG
CTGATCGCGC TGCGCTCGAC CTACGGCGCG CTCGTGTTCG CGTGCTTCAG CCTGTTGTGG
ACCGGCCTCA CGTTCCTGCT GAGCCAGCCG CCGTACAGCT ACTCCGAAGG ACAGATCGGC
CTGTTCGGCA TCGTCGGCGC GGTGGGCGCG CTCGCGGCGA CGTCGGCCGG CCGGTTCGTC
GATCGCGGTC ACGGCAATGC GGCGACCGGC CTGTTCGCGG CGGCCGTGCT CGGCTCGTTC
GCGCTGATCG CGACCGGCGC GCATTCGCTC GCGGCGCTGA TCGCGGGCAT CCTGCTGCTC
GACGTCGGCG TGCAGGGCAT GCACATCTCG AACCAGAGCG TGATCTATGC GCTCGCCGGC
CATGCGCGCA GCCGCGTGAC GACGATCTAC CTGACGAGCT ACTTCATCGG CGGCGCGCTC
GGCTCGTTCG CCGCGAGCGT CGCGTACGGC CTCGACGGCT GGCGCGGCGT GTGTATCGCG
GGTGCGGCGC TGTCGGGCGT GCTGATCGCG CTGTGGCTCG CGTCGCAGCG CGTCGGCTCG
CGGCAGGTCA CGCAGTGA
 
Protein sequence
MTLLFACACG IVIGNIYYAQ PLLAAIAHSF GRAPTELGYL VTLTQLGYAA SLLLIVPLGD 
AVNRHTLIVR LLMLNVVALV AVTFSTNFTM FVVANVAVGF VTCSTQLLVP FAASLADARS
RGRAVGTVMS GLLLGILLAR VAAGAIADGF GWRAVYGIAA AMVLALTVVL AVKLPKDRRD
ARVDYPALMT SLVALVRAQP LIALRSTYGA LVFACFSLLW TGLTFLLSQP PYSYSEGQIG
LFGIVGAVGA LAATSAGRFV DRGHGNAATG LFAAAVLGSF ALIATGAHSL AALIAGILLL
DVGVQGMHIS NQSVIYALAG HARSRVTTIY LTSYFIGGAL GSFAASVAYG LDGWRGVCIA
GAALSGVLIA LWLASQRVGS RQVTQ