Gene Bcen2424_0468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_0468 
Symbol 
ID4450034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp519211 
End bp520701 
Gene Length1491 bp 
Protein Length496 aa 
Translation table11 
GC content63% 
IMG OID639692486 
Producthypothetical protein 
Protein accessionYP_834115 
Protein GI116688492 
COG category[S] Function unknown 
COG ID[COG3517] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03355] type VI secretion protein, EvpB/VC_A0108 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000282714 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCAGC AAACGGCTGC GGCCCAAGCG AGCGGCGCGG AATACGCCGC CGGGACTTCG 
CTGCTCGACG ACATCGTCGA GAAGAGCAAG GTCGCGAAAT CCGATTCCGA GCATGCGCGT
GCGAAGGACC TGATCGGCGA ACTCGTGCAT CAGGTGCTCG ACGGCACGGT GATCGTGTCG
GACAACCTGT CGGCCACGAT CGACGCGCGC GTCGCGGAGC TCGACCGCCT GATTTCCACG
CAGCTTTCCG CCGTGATGCA CGCGCCGGAA TTCCAGCGCC TCGAAAGCAC GTGGCGCGGG
ATGGATTATC TGGTCAAGGA AAGCAACACG GGCCAGACGA TCAAGATCAA GGCGCTGCAC
GCGCCGAAGC GCGATCTCGT GCGCGATTTC AAGGGCGCGA GCGAGTTCGA CCAGAGCGCG
CTGTTCAAGA AGGTCTACGA AGAGGAATTC GGCACGTTCG GCGGCTCGCC GTTCGGTGCG
CTGATCGGCG ATTACGAGAT CTCGCGCCAG CCGGAAGACA TGTACTTCAT CGAGCAGATG
TCGCATGTCG CGGCGGCCGC GCATGCGCCG TTCATCGCGT CGGCGTCGCC GGAGCTGCTC
GGCCTCGAGT CGTTCTCCGA CCTCGGCAAG CCGCGCGACC TCGGCAAGGT GTTCGACACC
GTCGAATACG CGAAGTGGAA GTCGTTCCGA GACGCCGAGG ATTCGCGCTA CGTCGGCCTG
ACGCTGCCGC GCTTTCTCGG CCGCCTGCCG TTCAATCCGA AGGACGGCCA GACCGCGGAG
AACTTCAACT TCGTCGAGGA CGTCGACGGC ACCGATCACG ACAAGTACCT GTGGTGCAAC
GCGGCATGGG CCTTCGCGGC CCGCCTGACG GCCGCGTTCG ACGACTTCGG CTGGTGCGCG
GCGATCCGCG GCGTCGAAGG CGGCGGCCTC GTCGAGGATC TGCCGACCCA CACGTTCAAG
ACCGACGACG GTGAAGTCGC GCTGAAGTGC CCGACCGAAA TCGCGATCAC CGATCGCCGC
GAGAAGGAGC TGAGCGATCT CGGCTTCATC CCGCTCGTCC ATTGCAAGAA CTCAGATTAC
GCCGCGTTCT TCGCTGCGCA GTCGGTGCAG AAGCCCAAGA AATACAGCAC CGACAGCGCG
AACGCGAATG CCGTCCTGTC CGCCCAGCTT CAGTACATCT TCTCGGTATC GCGCGTCGCG
CACTACCTGA AGGCGATGAT GCGGGACAAG ATCGGCAGCT TCGCATCGGC GCAGAACGTG
GAGACTTTCC TCAACCGGTG GATTTCGCAG TACGTCCTGC TCGACGACAA CGCCTCGCAG
GAACAGAAAG CGCAATTTCC GCTGCGCGAG GCATCCATAC AAGTGTCGGA GATTCCGGGC
AAGCCGGGCT CGTATCGTTC GGTCGCGTTC CTGCGCCCGC ACTTTCAGCT CGACGAACTC
TCGATTTCTC TGCGACTTGT CGCTGATCTG CCCAAACCGG CAAATTCATA A
 
Protein sequence
MNQQTAAAQA SGAEYAAGTS LLDDIVEKSK VAKSDSEHAR AKDLIGELVH QVLDGTVIVS 
DNLSATIDAR VAELDRLIST QLSAVMHAPE FQRLESTWRG MDYLVKESNT GQTIKIKALH
APKRDLVRDF KGASEFDQSA LFKKVYEEEF GTFGGSPFGA LIGDYEISRQ PEDMYFIEQM
SHVAAAAHAP FIASASPELL GLESFSDLGK PRDLGKVFDT VEYAKWKSFR DAEDSRYVGL
TLPRFLGRLP FNPKDGQTAE NFNFVEDVDG TDHDKYLWCN AAWAFAARLT AAFDDFGWCA
AIRGVEGGGL VEDLPTHTFK TDDGEVALKC PTEIAITDRR EKELSDLGFI PLVHCKNSDY
AAFFAAQSVQ KPKKYSTDSA NANAVLSAQL QYIFSVSRVA HYLKAMMRDK IGSFASAQNV
ETFLNRWISQ YVLLDDNASQ EQKAQFPLRE ASIQVSEIPG KPGSYRSVAF LRPHFQLDEL
SISLRLVADL PKPANS