Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_0465 |
Symbol | |
ID | 4449666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | - |
Start bp | 517014 |
End bp | 517625 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639692483 |
Product | hypothetical protein |
Protein accession | YP_834112 |
Protein GI | 116688489 |
COG category | [S] Function unknown |
COG ID | [COG3521] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03352] type VI secretion lipoprotein, VC_A0113 family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.144688 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGATCGT CCATGATTCG CTACGCGCTG CCGCTGGTTG CCTGCGCCCT TTTGGCCGGA TGCGCGGCCG CCCCGCTGCT CGGCTCGGCC GCGAGCGCCG TGATGTCCGC GGCCGGCATC GGCAAGCCCG AGGTGCCCGA CGCGCAGAAG CCGCCGCGCA ACATCGGGCT CACGCTGGCC GCCGCGCCGA ACCTGAATGC CGCGACCGAC CACAAGCCGC TCGCGCTCGT CGTCCGGCTT TATGCGCTGA AGGACCCGAC CTCGTTCCAG CAAGCGCCGT TCGACGCCTT TACCGATCCG ACCAAGGAAA AAGCTGCACT CGGCGCCGAT CTGCTGAATG TGCGCGAAAT CACGCTGATT CCGGGCCAGC GCTATACGGC AACCGAGAAG GTATCGCGCG AGGCCCAGGC ATTCGGCATC GTCGCGCTGT TCCGCGATCC CGCACTGCAA CGATGGAAAC TGACATTCGA TCCGGCGAAA TCGGAGAAAT CCGGCATAAT CATCGGCCTG CATAATTGCG CGATGACGGT CACCGACGGC ACGGTCATCG CACCGCAACA AGGTGCGCCT TCGCAACCGC TGAATTTGCT GTCTTCGGTC TCTTGCGGTT AA
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Protein sequence | MRSSMIRYAL PLVACALLAG CAAAPLLGSA ASAVMSAAGI GKPEVPDAQK PPRNIGLTLA AAPNLNAATD HKPLALVVRL YALKDPTSFQ QAPFDAFTDP TKEKAALGAD LLNVREITLI PGQRYTATEK VSREAQAFGI VALFRDPALQ RWKLTFDPAK SEKSGIIIGL HNCAMTVTDG TVIAPQQGAP SQPLNLLSSV SCG
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