Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_0439 |
Symbol | |
ID | 4450082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | - |
Start bp | 484755 |
End bp | 485960 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639692456 |
Product | peptidase S1 and S6, chymotrypsin/Hap |
Protein accession | YP_834086 |
Protein GI | 116688463 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family [TIGR02038] periplasmic serine pepetdase DegS |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTAGAC GCTTCTGGCT GTTCTTCGCG CAGGCGGTGA CCGTACTGCT CGCGCTGATG TTCATCGTCG TGACGCTCAA GCCGCAATGG CTGCAACGGC AAGGACAGCT CGGCAAGCAG CTCGCCACGC CGATCGTCGC GCTGCGGGAA GTCGCGCCGG GCATCGGCGG CGCACCGGCG ACCACGTCGT ACGCCGAAGC CGCGCAGAAG GCGATGCCGG CCGTCGTCAA CGTGTTCTCC AGCAAGGACG GCTCGCTGCC GCCCGACCCG CGCGCGAAAG ATCCGCTGTT CCGTTACTTC TTCGGCGACC GCAACGCCCG CAAGCAGCAG GACGAGCCGG CCGCCAACCT CGGCTCGGGC GTTATCGTGA GCCCTGAAGG TTACATTCTA ACGAACCAGC ACGTCGTGGA CGGCGCCGAC CAGATCGAAG TCGCGCTCGC CGACGGCCGC ACGGCCACCG CGAAAGTGAT CGGCAGCGAT CCCGAAACCG ATCTCGCGGT GCTGAAGATC AACATGACGA ACCTGCCGAC GATCACGCTC GGCCGCTCCG ACCAGTCGCG CGTCGGCGAC GTCGTGCTCG CGATCGGCAA TCCGTTTGGC GTCGGCCAGA CGGTCACGAT GGGGATCATC AGCGCGCTCG GCCGCAACCA CCTCGGCATC AACACGTTCG AGAACTTCAT CCAGACCGAT GCGCCGATCA ACCCCGGCAA CTCCGGCGGC GCGCTGGTCG ACGTGAACGG CAACCTGCTC GGCATCAACA CGGCGATCTA CTCGCGCTCG GGCGGCTCGC TCGGCATCGG TTTCGCGATT CCCGTCTCGA CCGCTCGCAC GGTGCTCGAG AGCATCATCA CGACGGGCTC GGTCACGCGC GGCTGGATCG GCGTCGAGCC GCAGGACGTC ACGCCGGAAA TCGCCGAGTC GTTCGGGCTG CAGCAGAAAT CGGGCGCGAT CGTCGCGGGC GTGCTGCAGG GCGGTCCGGC CGACAAGGCC GGCATCAAGC CGGGCGACAT CCTGGTGAGC GTGAACGGCG ACGAAATCAC CGACACGACG AAGCTGCTGA ACACCGTCGC GCAGATCAAG CCGGGCACGC CGACCAAGGT GCACGTCGTA CGCAAGGGCA AGCAGTTCGA CGTGAACGTC GTGATCGGCA AGCGCCCGCC GCCGCCGAAG CAGGCGCTCG ACGAGCAGGA CAACGATAGC GAATGA
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Protein sequence | MLRRFWLFFA QAVTVLLALM FIVVTLKPQW LQRQGQLGKQ LATPIVALRE VAPGIGGAPA TTSYAEAAQK AMPAVVNVFS SKDGSLPPDP RAKDPLFRYF FGDRNARKQQ DEPAANLGSG VIVSPEGYIL TNQHVVDGAD QIEVALADGR TATAKVIGSD PETDLAVLKI NMTNLPTITL GRSDQSRVGD VVLAIGNPFG VGQTVTMGII SALGRNHLGI NTFENFIQTD APINPGNSGG ALVDVNGNLL GINTAIYSRS GGSLGIGFAI PVSTARTVLE SIITTGSVTR GWIGVEPQDV TPEIAESFGL QQKSGAIVAG VLQGGPADKA GIKPGDILVS VNGDEITDTT KLLNTVAQIK PGTPTKVHVV RKGKQFDVNV VIGKRPPPPK QALDEQDNDS E
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