Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_0409 |
Symbol | |
ID | 4448131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | - |
Start bp | 460612 |
End bp | 462381 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639692426 |
Product | ABC transporter |
Protein accession | YP_834056 |
Protein GI | 116688433 |
COG category | [R] General function prediction only |
COG ID | [COG4178] ABC-type uncharacterized transport system, permease and ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0847307 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCAAT CGATCGATCC CGTCCGCTCC GCCTCCGACG CGCCGCAGGA CGAGCGCCCG GTATCCGCAT GGAGCCTCAT CAAGCCCTAC TGGGTATCGT CCGAATGGAA AATCGCGTGG GGCCTGCTGG TCACGATCAT CGCGATCAAC CTCTGCGTGG TCTGGATCAA CGTCCGGCTG AACAAGTGGA ACGCGCAGTT CTACAACGCG CTGCAGTCGA AGGACGTCCA CGACTTCCCG AACCTGCTGA TGCAGTTCTC CGCGCTCGCC TTCGCGTTCA TCATCCTCGC CGTGTACGGC CGCTACCTGC GGCAGATGCT CGGCTTCCGC TGGCGCCAGT GGCTCACCGA CCGCTTCCTC GGTCAGTGGC TCGGCGATCG CGCGTTTTAC CGGATCGAAC GTGACCGTCT CGCCGACAAC CCCGACCAGC GGATCACCGA CGACCTCCAG TCGTTCGCGA CCACGACGCT CGCGCTGTCG CTCGACCTGC TGTCGACGGT CGTCACGCTC GTGTCGTTCA TCACGATCCT GTGGTCGCTC GCCGGCGCGC TGACGTTCAC GCTCGGCGCG ACGCCGATTG CGATTCCCGG CTACATGGTG TGGGCGGCCG CGCTGTACGC GGTGATCGGC TCGCTGATCA TCCAGAAGGT CGGCCATCCG CTCGTGTCGA TCAACTACCA GCAGCAGCGC GTCGAGGCCG ATTTCCGCTT CGGGCTGATC CGCGTGCGCG AGAACGCCGA GCAGATCGCG TTCTACGACG GCGAGAAGAC CGAGGCCGGC AACGCGCAGA CCCTCTTCAC GCGCATCCGC GACAACTGGT GGCGCGTGAT GAAGTACACG AAGCGGCTCA CGTTCGTGCT GAGCTTCTAC GGGCAGATCG CGATCATCTT CCCGCTCGTC GTCGCGGCGC CGCGCTACTT TGCCGGTGCG TTCTCGTTCG GCGTGCTGAT GCAGATCTCG TCGGCGTTCG GCACCGTCAG CGACTCGTTC TCGTGGTTCA TCAACAGCTA CTCGACCCTC GTCGAATGGC GCGCCACCGT CAACCGTCTG CGCGAATTCA AGCGTGTGAT GGGCACGTCG CACCTGAAGG AAAGCCTGTC GCCCGCGACC GAGCACGGCG GCATCAACCT GCACTACATC GACGCCGCGA AACTGTCGAC GTCGTCGCTC AAGCTCGCGC TGCCGAACGG CAACGCGCTC GCGAACATCG GCGACGTCAC GATCGAGCCC GGCTCGCGCT GGCTCGTGAT CGGCAAGTCG GGTTCCGGCA AGAGCACGTT CATGCGCGCG CTCGCGGGCC TCTGGCCGTT CGGCGACGGC GCGATCGACG CGCCGGTCGG CGCGCGGATG ATGTTCGTGC CGCAAACCAG CTATTTGCCG ATCGGCACGC TGAAGGCCGC GCTCACCTAC CCGGCGACGC CCGACACCTT CAGCGACGAA GCGTGCCGCG ATGCGCTGCG CGCGTGCCGC CTCGAGGATT ACGTCGAGCG CCTCGACGAA ACCGCGCACT GGACCCGCGT GCTGTCGCCG GGCGAACAGC AGCGCCTGGC CGGCGCGCGC GTGCTGCTGC ACAAGCCCGA CTTCCTGTTC CTCGACGAAG CGACCAGCGC GCTCGACGCC GACAACGAAG CCCGCCTCTA TCACCTGTTC GCCGAGCGGC TGCCGAAGGC TGCGATCGTC AGCATCGCGC ACCGCGAGTC GCTGGCCGCG TTCCACGTCG GCACGATCAA CGTCGAGCGC GTGGGCAGCG ACGACAAGGT CGCCGCGTGA
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Protein sequence | MTQSIDPVRS ASDAPQDERP VSAWSLIKPY WVSSEWKIAW GLLVTIIAIN LCVVWINVRL NKWNAQFYNA LQSKDVHDFP NLLMQFSALA FAFIILAVYG RYLRQMLGFR WRQWLTDRFL GQWLGDRAFY RIERDRLADN PDQRITDDLQ SFATTTLALS LDLLSTVVTL VSFITILWSL AGALTFTLGA TPIAIPGYMV WAAALYAVIG SLIIQKVGHP LVSINYQQQR VEADFRFGLI RVRENAEQIA FYDGEKTEAG NAQTLFTRIR DNWWRVMKYT KRLTFVLSFY GQIAIIFPLV VAAPRYFAGA FSFGVLMQIS SAFGTVSDSF SWFINSYSTL VEWRATVNRL REFKRVMGTS HLKESLSPAT EHGGINLHYI DAAKLSTSSL KLALPNGNAL ANIGDVTIEP GSRWLVIGKS GSGKSTFMRA LAGLWPFGDG AIDAPVGARM MFVPQTSYLP IGTLKAALTY PATPDTFSDE ACRDALRACR LEDYVERLDE TAHWTRVLSP GEQQRLAGAR VLLHKPDFLF LDEATSALDA DNEARLYHLF AERLPKAAIV SIAHRESLAA FHVGTINVER VGSDDKVAA
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