Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_0400 |
Symbol | |
ID | 4448122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | - |
Start bp | 446445 |
End bp | 447176 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639692417 |
Product | OmpW family protein |
Protein accession | YP_834047 |
Protein GI | 116688424 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3047] Outer membrane protein W |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.869895 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACGAA AACTGGCCAT TACGGGGGCC GCAGCGCTCG CATTCACGTT CGCGGGCGGT ACGGCACATG CACAATCCGC AGGTGATTTC TACGTCAGCA CCGGCTGGCT GCACCTTTCG CCGCAGGACA GCAGTGACCC GCTGTTCGTC TACCGCGTAG GCGGCACGCC CATCAATCAA TCGATTCCCA ACACCGGCGC CGGCATCAAC GACGCCGACA CGCTGGGGCT CGCAGCAGGC TACTTCGTCA CCGACCATAT CTCCACCGAG CTCGTGATGG GGATCCCGCC GAAGTTCGAC ATCACCGGCA AGGGTCAGTT CGACAGATTC GGCGTACTCG GCCGTGCATA CCAGTGGAGC CCTGCCGTCC TGCTTCGCTA CCACTTCAAC GACGCCAATG CGAAGTTCCG TCCGTATGTC GGCGTCGGTG CGACGTACGT CTGGTTCACC GGCGCCAAGA TCACCAACAG CGCGTTCGAG AACGGCGTGC TCGGCGGCCC GACCAGCGCG ACGACCAGCA ACCAGTGGGC GCCCGTGCTC AACGCCGGCT TCACGTACAA CTTCACGAAA CACTGGTTCG CAGGCCTGTC ACTGTCGTAC ATCCCGGTCA GCGTGACCGC GACGTTCACG ACGGCCCGCC GGACGCCGGT CGGGACGCTG ACGGAAACGT CGAAGGCCCA CATCTCGCTG AACCCGATCG TCACGTACCT GAACCTCGGC TACCGCTTCT AA
|
Protein sequence | MKRKLAITGA AALAFTFAGG TAHAQSAGDF YVSTGWLHLS PQDSSDPLFV YRVGGTPINQ SIPNTGAGIN DADTLGLAAG YFVTDHISTE LVMGIPPKFD ITGKGQFDRF GVLGRAYQWS PAVLLRYHFN DANAKFRPYV GVGATYVWFT GAKITNSAFE NGVLGGPTSA TTSNQWAPVL NAGFTYNFTK HWFAGLSLSY IPVSVTATFT TARRTPVGTL TETSKAHISL NPIVTYLNLG YRF
|
| |