Gene Bcen2424_0400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_0400 
Symbol 
ID4448122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp446445 
End bp447176 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content63% 
IMG OID639692417 
ProductOmpW family protein 
Protein accessionYP_834047 
Protein GI116688424 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3047] Outer membrane protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.869895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGAA AACTGGCCAT TACGGGGGCC GCAGCGCTCG CATTCACGTT CGCGGGCGGT 
ACGGCACATG CACAATCCGC AGGTGATTTC TACGTCAGCA CCGGCTGGCT GCACCTTTCG
CCGCAGGACA GCAGTGACCC GCTGTTCGTC TACCGCGTAG GCGGCACGCC CATCAATCAA
TCGATTCCCA ACACCGGCGC CGGCATCAAC GACGCCGACA CGCTGGGGCT CGCAGCAGGC
TACTTCGTCA CCGACCATAT CTCCACCGAG CTCGTGATGG GGATCCCGCC GAAGTTCGAC
ATCACCGGCA AGGGTCAGTT CGACAGATTC GGCGTACTCG GCCGTGCATA CCAGTGGAGC
CCTGCCGTCC TGCTTCGCTA CCACTTCAAC GACGCCAATG CGAAGTTCCG TCCGTATGTC
GGCGTCGGTG CGACGTACGT CTGGTTCACC GGCGCCAAGA TCACCAACAG CGCGTTCGAG
AACGGCGTGC TCGGCGGCCC GACCAGCGCG ACGACCAGCA ACCAGTGGGC GCCCGTGCTC
AACGCCGGCT TCACGTACAA CTTCACGAAA CACTGGTTCG CAGGCCTGTC ACTGTCGTAC
ATCCCGGTCA GCGTGACCGC GACGTTCACG ACGGCCCGCC GGACGCCGGT CGGGACGCTG
ACGGAAACGT CGAAGGCCCA CATCTCGCTG AACCCGATCG TCACGTACCT GAACCTCGGC
TACCGCTTCT AA
 
Protein sequence
MKRKLAITGA AALAFTFAGG TAHAQSAGDF YVSTGWLHLS PQDSSDPLFV YRVGGTPINQ 
SIPNTGAGIN DADTLGLAAG YFVTDHISTE LVMGIPPKFD ITGKGQFDRF GVLGRAYQWS
PAVLLRYHFN DANAKFRPYV GVGATYVWFT GAKITNSAFE NGVLGGPTSA TTSNQWAPVL
NAGFTYNFTK HWFAGLSLSY IPVSVTATFT TARRTPVGTL TETSKAHISL NPIVTYLNLG
YRF