Gene Bcen2424_0399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_0399 
SymbolugpQ 
ID4448121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp445496 
End bp446266 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content70% 
IMG OID639692416 
Productcytoplasmic glycerophosphodiester phosphodiesterase 
Protein accessionYP_834046 
Protein GI116688423 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCACCC GTATCGACTG GCCCTATCCG CGTGTCGTCG CCCATCGCGG CGGCGGCACG 
CTCGCACCGG AGAACACGCT GGCCGCGCTC GACGAGGGCG CGCGGCGCGG GCACCGGATG
GTCGAATTCG ACGCGAAACT GTCGGCCGAC GACGTGACGT TCCTGCTGCA TGACGATACG
GTCGACCGGA CCTCGAACGG CCACGGAGCG GCGGCGGGCA TGCGTTATGC GGCGCTGGCC
GCGCTCGACG CGGGCGCGTG GCGCGATGCG CGCTTCGCGG GCGAACGGAT GCCGACGCTC
GAGGCGGCGG CGGCGCGCTG CCTCGCGCAC GGGCTGGCCG CGAACGTCGA GATCAAGCCG
TGCCCGGGGC GCGAGCGCGA AACCGGGCAG CGCGTGGCGG CCGACGCGGC TGCGTACTGG
CGCGATGCCG CCGTTGCGCC GTTGCTGTCG TCGTTCTCGT TCGAGGCGCT GCAACAGGCG
CGTGCGACGG TGCCGGCGTT GCCGCGCGGG ATGCTCTACG AAGTCGTGCC GGACGACTGG
CATGCGCAGG TCATCGATGC GCTCGACTGC GTATCGTTGC ATGCAGACCA CACTCGGCTC
GACGAATCGC TGGTGCGCGC GATCAAGGCG GCCGGCTTGC GCATCCTGGT TTACACGGTG
AACGACCTCG AACGGGCACG CGAACTCGCG CGCTGGGGTG TCGATGCCGT CTGCACGGAC
CGCATCGACC TGATCGCGCC CGATGCGCTG GACGACATCG ACGTCGTCTA G
 
Protein sequence
MITRIDWPYP RVVAHRGGGT LAPENTLAAL DEGARRGHRM VEFDAKLSAD DVTFLLHDDT 
VDRTSNGHGA AAGMRYAALA ALDAGAWRDA RFAGERMPTL EAAAARCLAH GLAANVEIKP
CPGRERETGQ RVAADAAAYW RDAAVAPLLS SFSFEALQQA RATVPALPRG MLYEVVPDDW
HAQVIDALDC VSLHADHTRL DESLVRAIKA AGLRILVYTV NDLERARELA RWGVDAVCTD
RIDLIAPDAL DDIDVV