| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_0331 |
|---|
| Symbol | |
|---|
| ID | 4449687 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 375135 |
|---|
| End bp | 376400 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639692340 |
|---|
| Product | GDSL family lipase |
|---|
| Protein accession | YP_833978 |
|---|
| Protein GI | 116688355 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2755] Lysophospholipase L1 and related esterases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000000381329 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCATTTC GAAGCAGTTT CGCCGCGGCC GTGCTGGGTG CGGCCGTTCT CGTGGCGCCG
CTTGCGGCGT CGGCCGCACC GGCCGGGTGG GTCGCCGCAT GGGCGACCGC GCTGCAGCCG
ATTCCCGATC TCGCCGCGCC GCCGCCGCTT TATCGCGCCC CCGACGTGGC CGGGCGGACC
GTGCGCCAGA TCGTCTACCC GACCGTGTCG GGGCGCGCCG CGCGGATTCG CGTGAGCAAT
GCATACGGTC GCGCGCCGCT GGTCGTCGAG GCCGCGAGCC TGGCGCGCGC CGGCGACGGG
GCTGCGCTCG CCGGCGGTGC GGCGGTGCCG GTTCGGTTCG GCGGCAAGGC GTCGGTGACG
CTCGCACCGG GAGCGGAGCT CGAAAGCGAC CCGGTGACGA TCGGCGTGAC GGCCGCGCAG
CCGTATGCGA TCAGTCTCCA GATGGGGCCG GACCAGCGGA TGACGGTCTG GCATCGCGTA
TCGAACCAGT TCAATTACGT GTCCGCGCAG GGTGATCACG TAAGCGATCC GGGTGCCGCC
GACTTCCGGA CCCGTTTTAC CCAATATGCG TGGGTGACCG AGCTCGCCGT CGAAGCCGGC
TCCGCGCACG CCAGCGTAGC GGCGATCGGC GATTCGATCA CCGACGGGCT GCGCTCCAGC
GTGAACCGGA ACCGCCGCTG GCCGGACGCG CTCGCGCGCC GGCTGACGGC GTCGGGCGTC
GATTCGATCG GTGTCGTGAA TCTTGGCATC AGCGGGAACC GGCTGCTCAG CGATTCCGCT
TGCTACGGCA CGTCGCTGGC GTCGCGATTC GAGCGCGATG CGCTGTCGCG CTCGGGCGTG
AAGGCGGCGA TCGTGCTGAT CGGGATCAAC GACATCAACT TCGCGGAGAT GCCGCCGCGC
GCGGGGCTCG ATTGCGATCA CCCGCATACG CAGGTGACGG CCGCGTCGCT GATCGACGGC
TATCGCCGCC TGATCGAGGC GGCGCACCGG CAGGGCGTGA AGGTGTTCGG CGCGACGCTC
ACGCCAGCGG CGTTGCCGGC CGGACGCGAG GCGATCCGGC TCGAGGTGAA CCGGTGGATT
CGCAGCGGCG GCGGGTTCGA CGGCGTGGTG GACTTCGACG CGGTGCTGCG CGACCCGGCG
CGCCCAAGCG TGCTGCAACG CCGATACGAT AGCGGCGACG GTATCCATCC GAGCGATGCG
GGCTACACGG CGATGGCTGG CGCGGTGCCG GTCGAGCGAC TGCAGGCCGC GGTGGGCGGC
AAGTGA
|
|---|
| Protein sequence | MSFRSSFAAA VLGAAVLVAP LAASAAPAGW VAAWATALQP IPDLAAPPPL YRAPDVAGRT
VRQIVYPTVS GRAARIRVSN AYGRAPLVVE AASLARAGDG AALAGGAAVP VRFGGKASVT
LAPGAELESD PVTIGVTAAQ PYAISLQMGP DQRMTVWHRV SNQFNYVSAQ GDHVSDPGAA
DFRTRFTQYA WVTELAVEAG SAHASVAAIG DSITDGLRSS VNRNRRWPDA LARRLTASGV
DSIGVVNLGI SGNRLLSDSA CYGTSLASRF ERDALSRSGV KAAIVLIGIN DINFAEMPPR
AGLDCDHPHT QVTAASLIDG YRRLIEAAHR QGVKVFGATL TPAALPAGRE AIRLEVNRWI
RSGGGFDGVV DFDAVLRDPA RPSVLQRRYD SGDGIHPSDA GYTAMAGAVP VERLQAAVGG
K
|
|---|
| |