| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_0304 |
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| Symbol | |
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| ID | 4450228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | - |
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| Start bp | 345133 |
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| End bp | 346338 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639692313 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_833951 |
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| Protein GI | 116688328 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0944915 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCCGACC ACAATCTGGA CAAACTGAAA ATCGACCGGC GTCCGATCGC ACCGGTGCCG
CGTCGGCGCC GGTGGGCCCG CTACGCGGTC GCCGCCGCGC TGATCGTCAT CGCGATCGGC
GCCGGCCTCG CCCTCACCGG CCGGCCGACC GTCGACACCA CCTCCGTCAC GTCCGCCTAC
CCGTACCAGA ACGACACGCA ACTCAACGCG ACCGGCTACG TCGTGCCGCA GCGCAAGGCC
GCGGTCGCGT CGAAGGGCCA GGGGCGCGTC GAATGGCTCG GCGTGCTCGA AGGCACGCGC
GTGAAGAAGG ACGAGATCAT CGCGCGCCTC GAAAGCAACG ACGTGCAGGC GTCGCTTGCG
CAGGCGCGCG CGCAGGTGCA GGTCTCCCGC GCGAACCTCG GCGTCGCGCA GGCCGAGCTG
AAGGACGCCG AGATCGCATT GCGCCGCACG TCCACGCTCG CGCCGAAGGG CGCGGTGCCG
GCCGCGCAGC TCGATATCGA CACGGCGCGC GTGAACAAGG CGCGCGCGAC GCTCGACAGC
GACCAGGCCG CGATCGCGTC GGCCGAAGCG AACGCGCAGG CCGCGCAGGT GGCGGTCGAC
CAGACGGTGA TCCGCGCGCC GTTCGACGGC ATCGTGCTCG CCAAGCATGC GAACGTCGGC
GACAACATCA CGCCGTTCTC GTCCGCGTCG GACAGCAAGG GCGCGGTCGT GACGATCGCC
GACATGGAGA CGCTCGAGGT CGAGGCCGAC GTCGCCGAAT CGAACATCGC GAAGATCCGC
GCCGAGCAGC CGTGCGAGAT CCAGCTCGAT GCGCTGCCCG ACCTGCGCTT CGCGGGCCGC
GTGTCGCGCA TCGTGCCGAC CGTCGACCGT TCGAAGGCCA CCGTGCTCGT GAAGGTGCGC
TTCGTCGACC GCGACGAACG CGTGCTGCCC GACATGAGCG CGAAGATCGC GTTCCTGTCG
AAGCCCGCGT CGGCGCAGGA CCGGCAGCCG GTGACCGCCG TGCAGGCGAG CGCCGTGGTC
GAGCGCGACG GCCGGCCGGT CGTGTTCGTC GTGAAGGACG ACGCCGTGCA TGCGGTGGCC
GTGGCGAAGG GCGCGCGGAT CGGCGAACTC GTCGCGGTGC GCGGCGTGAC ACCCGGCGAC
ACGGTCGTGC TCGCGCCGGG CGCGAAGCTG AAGGACGGCG CGAACGTGAC CGTCGCGAAG
AAGTAG
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| Protein sequence | MPDHNLDKLK IDRRPIAPVP RRRRWARYAV AAALIVIAIG AGLALTGRPT VDTTSVTSAY
PYQNDTQLNA TGYVVPQRKA AVASKGQGRV EWLGVLEGTR VKKDEIIARL ESNDVQASLA
QARAQVQVSR ANLGVAQAEL KDAEIALRRT STLAPKGAVP AAQLDIDTAR VNKARATLDS
DQAAIASAEA NAQAAQVAVD QTVIRAPFDG IVLAKHANVG DNITPFSSAS DSKGAVVTIA
DMETLEVEAD VAESNIAKIR AEQPCEIQLD ALPDLRFAGR VSRIVPTVDR SKATVLVKVR
FVDRDERVLP DMSAKIAFLS KPASAQDRQP VTAVQASAVV ERDGRPVVFV VKDDAVHAVA
VAKGARIGEL VAVRGVTPGD TVVLAPGAKL KDGANVTVAK K
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