Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_0288 |
Symbol | |
ID | 4450959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | + |
Start bp | 329811 |
End bp | 331178 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639692296 |
Product | RNA-directed DNA polymerase (Reverse transcriptase) |
Protein accession | YP_833935 |
Protein GI | 116688312 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGATGC GACAGGCAAT GCGTCAGATG CCCGTGCGAG CGGGGCGAGC GGGAAGCATA CGCGGTGAAG CTGCGTCTAT GCCCGTGAGC GACGAAGGCT GTTGCCCGCG CCATGAATCC GGGGACACAG GGTCACCGCT GCTGATGGCG GCGCTGACGA GGGAGAACCT GAAGCAGGCG TTCAAACGGG TACGGGCCAA CAAGGGAGCC GCTGGCGTGG ACGGTCTGAA TATTGACCAG ACGTCGCGCC ATCTGGTGAC GGCGTGGCCC GCGATCCGTG AACAGTTGCT GAAGGGGACG TACCGGCCCA GTCCGGTACG GCGGGTGACG ATTCCGAAAC CGGACGGAGG CGAGCGCGAG CTTGGCATCC CGACGGTGAC GGACCGGCTG ATCCAGCAGG CGCTGCTGCA GGTGCTGCAA CCGGTTCTGG ACCCTGGCTT CAGCGAGCAC AGCTACGGCT TCCGGCCTGG ACGGCGTGCG CACGATGCGG TGCTTGCCGC GCAGTCGTAC GTGCAGTCGG GTCGGCGAAT CGTGGTGGAT GTTGATCTGG AGAAGTTCTT CGACCGGGTC AACCACGACA TCCTGATCGA CCGACTGCAG AAACGTATTG GGGACGCCAG CGTGATCTGG CTGATCCGGG CGTATCTGAA CAGCGGCATC ATGGATGGCG GCGTGGTTCA GCAGCGCGAA CAGGGCACGC CACAGGGCGG GCCGCTATCG CCGTTGCTGG CCAACGTGTT GCTCGATGAG GTGGACAAGG AACTGGAGCG GCGAGGCCAC TGCTTCGCGC GCTATGCCGA CGATGCGAAT GTCTATGTTC GTAGCCGCCG TGCTGGCGAG CGGGTGATGG CGCTGCTGCG TCGTCTGTAT GGGCAACTGC GGTTGAAGGT CAACGAGACC AAAAGCGCAG TCGCCAGTGT GTTCGGTCGC AAGTTTCTGG GCTACAGCCT ATGGGTAGCG TCCGGCGGTG TCATCAAGCG CAAGGTGGCG GCCAGACCGC TGCTGGCGTT CAAACGCCGC ATTCGTGAAC TGACCGGCCG TAGCGGCGGG CGCAGCATGA AGGACGTGGT GGAACGGTTA CGGCCTTATG TATTGGGCTG GAAGGCGTAC TTCCGGATGG CGCAGACGCC ACGAGTCTGG CTGGATCTGG ACAAGTGGAT GCGTCACCGG CTGCGTGTCA TCCAGCTCAA ACACTGGCGC CGCGGTCCGA CTATCTACCG GGAACTGCGT GCGCTGGGCG CACCGTCCGC TGTGGCGCAA CAGGTGGCGG CGAACAGCTG TCGCTGGTGG CGTAATAGCG GCAAGCTTCT GAATAGCGTA TTGACCCTCG CGTACTTCGA CCGGCTGGGT GTGCCCCGAC TCTCATAA
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Protein sequence | MSMRQAMRQM PVRAGRAGSI RGEAASMPVS DEGCCPRHES GDTGSPLLMA ALTRENLKQA FKRVRANKGA AGVDGLNIDQ TSRHLVTAWP AIREQLLKGT YRPSPVRRVT IPKPDGGERE LGIPTVTDRL IQQALLQVLQ PVLDPGFSEH SYGFRPGRRA HDAVLAAQSY VQSGRRIVVD VDLEKFFDRV NHDILIDRLQ KRIGDASVIW LIRAYLNSGI MDGGVVQQRE QGTPQGGPLS PLLANVLLDE VDKELERRGH CFARYADDAN VYVRSRRAGE RVMALLRRLY GQLRLKVNET KSAVASVFGR KFLGYSLWVA SGGVIKRKVA ARPLLAFKRR IRELTGRSGG RSMKDVVERL RPYVLGWKAY FRMAQTPRVW LDLDKWMRHR LRVIQLKHWR RGPTIYRELR ALGAPSAVAQ QVAANSCRWW RNSGKLLNSV LTLAYFDRLG VPRLS
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