Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_0111 |
Symbol | hemE |
ID | 4450397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | + |
Start bp | 113625 |
End bp | 114803 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639692118 |
Product | uroporphyrinogen decarboxylase |
Protein accession | YP_833758 |
Protein GI | 116688135 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0979299 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGCCA TCGCATCGGC ATGCGCAGCC CGATCGCGGC TGTCCGGTAA AATGCCGCTT TGCCTTCGCA TCGTCGCTCC TACCGTGGCC CATAACCTGC TCAACGACAC CTTCCTGCGT GCGCTTCTGC GCGAGCCGAC CGACTACACG CCGATCTGGC TGATGCGCCA GGCCGGCCGC TACCTGCCCG AATACAACGC GACGCGCGCG CGCGCCGGCA GCTTCCTCGG CCTCGCGAAG AATCCCGACT ACGCGACCGA AGTGACGTTG CAGCCGCTCG AGCGCTTTCC GCTCGACGCG GCGATTCTGT TCTCGGACAT CCTGACGATT CCCGACGCGA TGGGGCTCGG CCTCGACTTC CAGGTCGGCG AAGGGCCGAA GTTCGCGCAT CCGGTGCGCA CCGAGGCCGA CGTCGCGAAG CTCGCGGTGC CGGACATCGA GGAGACGCTC GGCTACGTGA CGGGCGCCGT GCGCGAGATC CGCCGCGCGC TCACCGACGG CCAGGGCCGG CAGCGCGTGC CGCTGATCGG CTTCTCGGGC AGCCCGTGGA CGCTCGCGTG CTACATGGTC GAAGGCGGCG GCTCGGACGA TTTCCGCACG GTGAAGTCGA TGGCGTATTC GCGCCCCGAC CTGATGCACC GAATTCTCGA CGTGAACGCG CAGGCGGTGG CCGCGTACCT GAACGCGCAG ATCGAAGCGG GCGCGCAGGC CGTGATGATC TTCGATACGT GGGGCGGCGC GCTGGCCGAC GGCGCGTATC AGCGCTTCTC GCTCGACTAC ATCCGCCGCG TGGTGTCGCA GCTCAAGCGC GAGCACGACG GCGAACGCGT GCCGGTGATC ACGTTCACGA AGGGCGGCGG GCTGTGGCTC GAGGAGATCG CGGCGACCGG CGTCGACGCG GTCGGGCTCG ACTGGACGGT CAACCTCGGC GCCGCGCGCG AGCGCGTCGC GGGGCGCGTG GCGCTGCAGG GCAACCTCGA CCCGACGATC CTGTTTGCGC CGCCGGCCGC GGTGCGCGAA CAGGTGCGCG CGGTGCTCGA CAGCTACGGC AACCATCCGG GCCACGTGTT CAACCTCGGG CACGGCATCT CGCAATTCAC GTCGCCCGAC CACGTCGCCG AACTCGTCGA CGAAGTACAT ACCCACAGCC GCGCGATCCG TAGCGGAGCG GCGGGCTGA
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Protein sequence | MAAIASACAA RSRLSGKMPL CLRIVAPTVA HNLLNDTFLR ALLREPTDYT PIWLMRQAGR YLPEYNATRA RAGSFLGLAK NPDYATEVTL QPLERFPLDA AILFSDILTI PDAMGLGLDF QVGEGPKFAH PVRTEADVAK LAVPDIEETL GYVTGAVREI RRALTDGQGR QRVPLIGFSG SPWTLACYMV EGGGSDDFRT VKSMAYSRPD LMHRILDVNA QAVAAYLNAQ IEAGAQAVMI FDTWGGALAD GAYQRFSLDY IRRVVSQLKR EHDGERVPVI TFTKGGGLWL EEIAATGVDA VGLDWTVNLG AARERVAGRV ALQGNLDPTI LFAPPAAVRE QVRAVLDSYG NHPGHVFNLG HGISQFTSPD HVAELVDEVH THSRAIRSGA AG
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