Gene Bcen2424_0091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_0091 
Symbol 
ID4449554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp93365 
End bp95149 
Gene Length1785 bp 
Protein Length594 aa 
Translation table11 
GC content67% 
IMG OID639692098 
ProductABC transporter related 
Protein accessionYP_833738 
Protein GI116688115 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component
[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGACGA TGGTACGCAA CAAGACCTTC TGGCTGTTTC TCGTGGTGCT GTTCGCGCTG 
CCGGTGCTGC CCGGCGCGCT CCAGGTACCG GAGTACTGGA TCACGCTGCT GAACTACATC
GGCCTGTATG CGATCGTCGC GATCGGGCTC GTGCTGTTGA CGGGCGTCGG CGGGATGACG
AGTTTCGGGC AGGCCGCGTT CGTCGGCATT GGCGCGTATG CGACCGCGTT CCTGACGACA
CGCTACGGCG TGTCGCCGTG GCTCGCGCTG ATCGTCGGCG TCGTGCTGAC GGCGCTCGTC
GCGCTCGTGC TCGGCGCCGT GACGATGCGG CTGTCCGGGC ACTTCCTGCC GCTCGGTACG
ATCGCGTGGG GCCTCGCGCT GTTCTACCTG TTCGGCAACC TCGAACTGCT CGGCAAGTAC
GACGGGATCA ACGGGATTCC GGCGCTGAAC CTGTTCGGCA TCGTGCTCGA GAGCGGCCGC
AGCCTGTATT TCCTGATCTG GGCCGTGGTG CTGGCCGCGA TCGTGTCGGT GCAGAACCTG
CTGAACAGCC GCCCGGGCCG CGCGATCCGC GCGCTGCGCG GCGGCGGCGT GATGGCCGAG
GCGATGGGCG TGAACACCGC GTGGATGCGC GTCGTGATCT TCGTCTACGC GGCCGTGCTC
GCGGCGGTAT CGGGCTTCCT GTACGCGCAC CTGCAACGCG CGGTGAACCC GACGCCGTTC
GGCCTGAACC ACGGGATCGA ATTCCTGTTC ATGGCCGTGG TGGGCGGCGT GTCGCACGTG
TGGGGCGCGG TGCTCGGCGC CGCGATCCTG ACCGTCCTGC AGGACTACCT GCAGACGCTG
CTGCCGAAGC TGCTCGGCTC GGAAGGCAAC TTCGAGATCA TCGTGTTCGG CGTGCTGATG
GTGCTGCTGC TGCAGTACGC GCGCCAGGGC GTATGGCCGT TCGTCGCGAG GCTGTTCCCG
CGCGGACCGC GCGCGCATGT GCCGGAGCAG GCCGACCCGC TGCCGCAGCG CGCGAAACCC
GTGGCCGGCG AGCCTCTGCT GGTCGTCGAC AACGCACGCA AGCAGTTCGG CGGGCTGGTG
GCCGTCAACG ACGTCAGCTT CGACGTGAAA GCGGGGCAGA TCATCGGGCT GATCGGCCCG
AACGGCGCGG GCAAGTCGAC CACGTTCAAC CTCGTGACCG GGGTGCTGAG GCCCACTGGC
GGTGCGATCA CGTTCCGTGG CGAGCGCATC GACGGGCTGA CGTCGCGTCA GATCGTGCGC
CGCGGCATCG GTCGCACGTT CCAGCACGTG AAGCTGTTGC CGGCGATGAC GGTGCTCGAG
AACGTCGCGA TCGGCGCCCA CCTGCGTGGT CATACCGGCG TGTGGCGCAG CATCGCGCGG
CTCAATGCGC ACGAGGAAGC GCAGTTGCTG GCCGAAGCCG CGCGCCAGAT CCGCCGCGTC
GGGCTCGAGA AGCACATGTA CGACGAAGCA GGCAGTCTCG CGCTCGGCCA GCAGCGGATT
CTCGAAATCG CGCGGGCGCT GTGCTGCGAT CCGACGCTGC TGTTGCTCGA CGAACCGGCC
GCGGGGCTGC GTTACCAGGA GAAACAGCAA CTCGCCGACC TGCTGCGGCG GCTGAAGGCC
GAAGGCATGA GCGTGTTGCT CGTGGAACAT GACATGGATT TCGTGATGAA TCTCACCGAC
CGGCTGGTGG TGATGGAATT CGGCACGCGG ATCGCGGAAG GGCTGCCGCA GGATGTGCAG
CAGGACCCGG CCGTGCTGGA AGCGTATCTG GGCGGGGTGG AGTGA
 
Protein sequence
MKTMVRNKTF WLFLVVLFAL PVLPGALQVP EYWITLLNYI GLYAIVAIGL VLLTGVGGMT 
SFGQAAFVGI GAYATAFLTT RYGVSPWLAL IVGVVLTALV ALVLGAVTMR LSGHFLPLGT
IAWGLALFYL FGNLELLGKY DGINGIPALN LFGIVLESGR SLYFLIWAVV LAAIVSVQNL
LNSRPGRAIR ALRGGGVMAE AMGVNTAWMR VVIFVYAAVL AAVSGFLYAH LQRAVNPTPF
GLNHGIEFLF MAVVGGVSHV WGAVLGAAIL TVLQDYLQTL LPKLLGSEGN FEIIVFGVLM
VLLLQYARQG VWPFVARLFP RGPRAHVPEQ ADPLPQRAKP VAGEPLLVVD NARKQFGGLV
AVNDVSFDVK AGQIIGLIGP NGAGKSTTFN LVTGVLRPTG GAITFRGERI DGLTSRQIVR
RGIGRTFQHV KLLPAMTVLE NVAIGAHLRG HTGVWRSIAR LNAHEEAQLL AEAARQIRRV
GLEKHMYDEA GSLALGQQRI LEIARALCCD PTLLLLDEPA AGLRYQEKQQ LADLLRRLKA
EGMSVLLVEH DMDFVMNLTD RLVVMEFGTR IAEGLPQDVQ QDPAVLEAYL GGVE