Gene Bcen2424_0052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_0052 
Symbol 
ID4448759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp53282 
End bp53788 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content68% 
IMG OID639692059 
Productgeneral secretion pathway M protein 
Protein accessionYP_833699 
Protein GI116688076 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3149] Type II secretory pathway, component PulM 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0147385 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCCG AACAACTGAA CCAGACGCTG GCCCAGTTCT GGGGCGAGCG CACGCCGCGC 
GAGAAGACGC TGCTCGGCTG GGGCGGCGCC GTGCTGGCGA TCGCGATCGC GTATTCGGTG
CTGTGGTCGC CCGCGCAGGA GGGCCGCGCG AGGATTCAGC GCGAGCTGCC CGCGATGCGC
CACGAACTCG CGCAGATGAC CGCGCAGGCG AACGAGGCGA AGTCGCTGGC CACCGCCGCG
CAGGGTGTCG CGCCGACCGG CCTCGCGCTG AAGGATGCGC TCACTGCATC GCTGTCCGAT
CACGGGCTGC AGGGCGCGCA GGTGCAGATC GTCGGCAATG GCGTGCAGAT CCAGATGAAG
AACGTGTCGT TCCCGGCATG GGCCCAGTGG CTCGACGATG CGCGCCGACA GTTCAAGGTG
CAGGTCGGCG AGGCGCATGC GACGGCGCTG AAGGAAGACG GTCAGGTGGA TCTGACGGCC
GTGATGCAGC CTTCCGTCCA GAAATAG
 
Protein sequence
MKAEQLNQTL AQFWGERTPR EKTLLGWGGA VLAIAIAYSV LWSPAQEGRA RIQRELPAMR 
HELAQMTAQA NEAKSLATAA QGVAPTGLAL KDALTASLSD HGLQGAQVQI VGNGVQIQMK
NVSFPAWAQW LDDARRQFKV QVGEAHATAL KEDGQVDLTA VMQPSVQK