| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_0050 |
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| Symbol | |
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| ID | 4448757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | + |
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| Start bp | 50854 |
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| End bp | 52425 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639692057 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_833697 |
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| Protein GI | 116688074 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.151271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGTACG CCTCCCTCCC GCGCGCCGTT CGCCCGCTGA GCGCCGCCGT CGCCATTGCG
ACGGCCGTGC TGCTCGCCGG CTGCGCCGTC GGGCCCGACT ATCACCGCCC CGACACGTCG
ATCCCCGCCG CGTTCAAGGA AGCGCCGGCC GGCTGGAAAG TCGCGCAACC CGCCGATCGC
ACCGACCGCG GCGCGTGGTG GACGGTCTAC AACGATCCGC AGCTCGATGC GCTGATCGGC
AGGCTCAACG CGTCGAACCA GACCATCGCG CAATCGGCGG CCGCCTACCG GCAGGCGCGC
GCGCTCGTCA CCGAGGCGCG CGCCGCGTAT TTCCCGACCG TCGGGCTGAC CGCATCGGGC
TCGCGCGCAC GGACGCCGCG CACGTCGCTG TCGTCGGGTT CGTCGTCGAA TTTCGGCAGC
GGGTCGACCG GATCGATCAA CAACAGCTAC AGCGTCGGCC TCGACGCCAG TTGGGAACCC
GACCTGTGGG GCAAGGTGAG CCGCACCGTC AGCGCGCAGC GCGCCGGCGA AGCGGCCGCC
GCGGCCGACC TCGCGAACGC GCGGCTGTCG CAGCAGGCGC TGCTCGCGCA GACCTATTTC
CAGTTGCGTA CGTCCGATGC GCTGCAAAAG CTGCTCGACG ACACCGTGAA GTCGTATGAA
CGCTCGCTGC AGCTCACGCA GAACCAGTAC GCGCAGGGCG TCGCCGCGCG CGCCGACGTG
ATCCAGGCGC AAACGCAGCT GCAGAGCGCG CAGGCCGCGC AGATCGACAA CGGCGTCGCC
CGCGCGCAGT ACGAGCATGC GATCGCGACG CTGATCGGCG AGCCCGCGTC GACCTTCTCG
CTGCCGCCGA ATCCGCTCGC GGCCGAACCG CCGGTCACGC CGGTCGACGT GCCGTCCGCG
ATCCTCGAGC GCCGGCCCGA CATCGCGGCG GCCGAGCGCC GCGCGGCGGC CGCGAACGAG
CAGATCGGCG TCGCGATCTC GGCGTTTTTC CCGACGCTCA CGTTGTCGGC CACCGGCGGC
TCCCAGAGCT CGGTGTGGTC GCAACTGTTC ACGCTGCCGG CGCGCTTCTG GACGGTCGGC
CCGCAGCTCG CGGCCACGCT GTTCGACGCA GGGCTGCGCG CCGCGCAGAC CGACGCCGCG
CGCGCGACCT ACGACCAGGA CGTCGCCGCC TATCGCCTCG CGGTGCTCAC CGCGTTCCAG
GACGTCGAGG ACAACCTCGC GTCGCAGCGC ATTCTCGCGC AGGAAATCGA CGTGCAGCGG
CAGGCCGTCG ACAGCGCCGA GCACGCGCTC GCGATCGTCA CGAACCAGTA CAAGGCCGGC
ACGGTCGCGT ACCTGAACGT GCTGACCGCG CAGACCACCG CGTTCACCGC GCAGCAAAAG
CTCGCGACGA TCGCCGGGCA GCGGATGGTG TCGTCGGTCG GGCTCGTGAA GGCGCTCGGC
GGCGGCTGGA ACGTATCGGA GATGGCGCGC GAGAACGGCG ACATGGCGGC GCCGGCGCCC
TTGCCGGCGT CCGGTACGGC CGCGCCCGCG GCCACCGCAC CGTCGGCCGC CGCGCCGCTC
GCGCAGAAGT AG
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| Protein sequence | MPYASLPRAV RPLSAAVAIA TAVLLAGCAV GPDYHRPDTS IPAAFKEAPA GWKVAQPADR
TDRGAWWTVY NDPQLDALIG RLNASNQTIA QSAAAYRQAR ALVTEARAAY FPTVGLTASG
SRARTPRTSL SSGSSSNFGS GSTGSINNSY SVGLDASWEP DLWGKVSRTV SAQRAGEAAA
AADLANARLS QQALLAQTYF QLRTSDALQK LLDDTVKSYE RSLQLTQNQY AQGVAARADV
IQAQTQLQSA QAAQIDNGVA RAQYEHAIAT LIGEPASTFS LPPNPLAAEP PVTPVDVPSA
ILERRPDIAA AERRAAAANE QIGVAISAFF PTLTLSATGG SQSSVWSQLF TLPARFWTVG
PQLAATLFDA GLRAAQTDAA RATYDQDVAA YRLAVLTAFQ DVEDNLASQR ILAQEIDVQR
QAVDSAEHAL AIVTNQYKAG TVAYLNVLTA QTTAFTAQQK LATIAGQRMV SSVGLVKALG
GGWNVSEMAR ENGDMAAPAP LPASGTAAPA ATAPSAAAPL AQK
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