| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_0040 |
|---|
| Symbol | fliM |
|---|
| ID | 4448509 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | - |
|---|
| Start bp | 43077 |
|---|
| End bp | 44075 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639692047 |
|---|
| Product | flagellar motor switch protein FliM |
|---|
| Protein accession | YP_833687 |
|---|
| Protein GI | 116688064 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1868] Flagellar motor switch protein |
|---|
| TIGRFAM ID | [TIGR01397] flagellar motor switch protein FliM |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTCACC AGGAGTTCAT GTCCCAGGAG GAGGTCGATG CCCTCCTCAA GGGCGTCACG
GGCGAAACCG ATGCAGTCGA CGAGCAGCGC GACACATCGG GCGTCCGCCC CTACAACATC
GCGACGCAGG AGCGGATCGT CCGCGGCCGG ATGCCCGGCC TCGAGATCAT CAACGACCGC
TTCGCGCGCC TGTTGCGGAT CGGCATCTTC AACTTCATGC GGCGCACGGC GGAAATTTCC
GTCAGCCAGG TGAAGGTGCA GAAGTACAGC GAATTCACCC GCAACCTGCC GATCCCGACC
AACCTGAACC TGGTGCACGT GAAGCCGCTG CGCGGCACGT CGCTGTTCGT GTTCGACCCG
AACCTCGTGT TCTTCGTCGT CGACAACCTG TTCGGCGGCG ACGGGCGCTT TCACACGCGC
GTCGAGGGCC GCGATTTCAC GGCCACCGAG CAGCGGATCA TCGGCAAGCT GCTGAACCTC
GTGTTCGAGC ACTACACGAC CGCGTGGAAG AGCGTGCGGC CGCTGCAGTT CGAATTCGTG
CGTTCCGAGA TGCACACGCA GTTCGCGAAC GTCGCGACGC CGAACGAGAT CGTGATCGTC
ACGCAGTTCT CGATCGAGTT CGGGCCGACC GGCGGCACGC TGCACATCTG CATGCCGTAC
TCGATGATCG AACCGATCCG CGACGTGCTC AGCTCGCCGA TCCAGGGCGA GGCGCTCGAA
GTCGACCGCC GCTGGGTGCG CGTGCTGTCG CAGCAGGTGC AGGCCGCGGA AGTCGAGCTG
ACCGCGAATC TCGCCGAGAT CTCGTCGACG TTCGAGAAGA TCCTGAACCT GCGCGCGGGC
GACGTGCTGC CGCTGGAGAT CGAGGACACG ATCACCGCGA AGGTCGACGG CGTGCCGGTG
ATGGAGTGCG GCTACGGAAT TTTCAATGGT CAATATGCGT TGCGCGTGCA GAAGATGATC
GGCGCGAGCG ATTCGATGAA GGAAGGTGGA TATGAGTGA
|
|---|
| Protein sequence | MGHQEFMSQE EVDALLKGVT GETDAVDEQR DTSGVRPYNI ATQERIVRGR MPGLEIINDR
FARLLRIGIF NFMRRTAEIS VSQVKVQKYS EFTRNLPIPT NLNLVHVKPL RGTSLFVFDP
NLVFFVVDNL FGGDGRFHTR VEGRDFTATE QRIIGKLLNL VFEHYTTAWK SVRPLQFEFV
RSEMHTQFAN VATPNEIVIV TQFSIEFGPT GGTLHICMPY SMIEPIRDVL SSPIQGEALE
VDRRWVRVLS QQVQAAEVEL TANLAEISST FEKILNLRAG DVLPLEIEDT ITAKVDGVPV
MECGYGIFNG QYALRVQKMI GASDSMKEGG YE
|
|---|
| |