Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_0027 |
Symbol | |
ID | 4448822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | - |
Start bp | 28136 |
End bp | 31162 |
Gene Length | 3027 bp |
Protein Length | 1008 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639692034 |
Product | type III restriction enzyme, res subunit |
Protein accession | YP_833674 |
Protein GI | 116688051 |
COG category | [V] Defense mechanisms |
COG ID | [COG3587] Restriction endonuclease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGGCTGC ATTTCGAAGC GGATCTCGAC TACCAGCGCG AGGCGATCGA CGCCGTCTGC GACCTGTTTC GCGGGCAGGA ATCGTATCGC GGCGACTTCA GCGTGCTCGC GAACGCCGCG CCCGGCACGA CGGCCGCCGC GCAAGGCTCG CTCGGCTTCG CGGTATCGGA GCAAGGCGTC GGCAACCGGC TGTCGCTGAC CGACGACGCG CTCGCGCGCA ATCTCGCCGA CGTGCAGTTG CGCGGCGGGC TGCCGCCGTC CGGCCTGCCC GGCTCGCGCG ACTTCACCGT CGAGATGGAG ACCGGCACCG GCAAGACCTA CGTGTACCTG CGCACGATCT TCGAGCTGAA CCGCCGCTAC GGCTTCACGA AATTCGTGAT CGTCGTGCCG TCGATCGCGA TCAAGGAAGG CGTGCACAAG ACGCTCGCGA TCACCGAGGA TCACTTCCGC GCGCTGTACG CGGGCGTGCC GTACGACTAC TTCCTGTACG ACTCCGCGAA GCTCGGCCAG GTGCGTCACT TCGCGGCGAG CGCGGCAATC CAGATCATGG TGATGACGGT CGCCGCGATC AACAAGAAAG AGATCAACAA CCTCTACAAG GACAGCGAGA AGACCGGCGG CGAGAAGCCC ATCGACCTGA TCCGCGCGAC GCGGCCGATC GTGATCGTCG ACGAGCCGCA AAGCGTCGAC GGCGGCCTCG AAGGGCGCGG GCGCGAAGCG CTCGCCGCGA TGGCGCCGCT CTGCACGCTG CGCTATTCGG CCACGCACGT CGACCGCCAT CACATGGTGT ACCGGCTCGA TGCGGTCGAC GCGTACGAGC GCAAGCTCGT CAAGCAGATC GAGATCGCGT CGGCGATCGT CGAGGATGCG CACAACAAGC CGTACGTGCG GCTCGTCGGC GTGTCGAACC GGCGCGGCGC GATCAGCGCG CGCGTCGAGC TCGACGTCGC GACGGCGGCC GGCGTGAAGC GCCAGATCGT GTCGGCGACC GACGGCGACG ATCTCGAACG CCTGACCAAG CGCGCGCTGT ACGCGGGGCT GCGGATCGGC GAAGTGCATG CGGTCAAGGG CGCCGAATAC GTGGAGCTGC GCCATCCGGA AGGCGAGGCG TTCCTGTCGC TCGGCGAGGC GTTCGGCGAC ATCGACACGC TGGCCGTACA GCGCGAGATG ATCCGCCGCA CGATCCGCGA GCATCTCGAC AAGGAGCTGC GCCTCGCCGA GCGCGGCGTG AAGGTGTTGT CGTTGTTCTT CGTCGACTCG GTCGAACGCT ATCGCCGCTA TGACGAGAAC GGCATGCCGG TGAAGGGCGA CTACGCGCTG ATCTTCGAAG AGGAATATGC GCGCGCGGCG CGCGTGCCGG CCTACCGTGC GCTGTTCGAC GGCGTCGACG TCGCGCTGGA AGTCGAGCGT GCGCACAACG GCTACTTCTC GATCGACCGC AAGGGCGGCT GGACCGACAC GAGCGAAAGC AGCGCGGCGG CCCGGGAGAA CGCGGAGCGT GCTTACGGCC TCATCATGCG CGAGAAGGAA GCGCTGCTGT CGTTCGACAC GCCGCTGAAG TTCATCTTCT CGCACTCGGC GCTGAAGGAA GGCTGGGACA ACCCGAACGT GTTCCAGATC TGCACGCTGC GCGACATCCA GACCGAACGC GAGCGCCGCC AGACGCTCGG CCGCGGGCTG CGCCTCGCGG TCGACCAGGA CGGCGAACGC GTGCGCGACG CGGGCGTGAA CACGCTCACC GTGATCGCGA CCGAGCGCTA CGAGTCGTTC GCCGAGAACC TGCAGAAGGA AATCGAGGCC GATACGGGCA TTCGTTTCGG GATCGTCGAG GAACACCAGT TCGCGGCGCT GCCGGTGCAG GAAGACGGCG GTCCCGCGCA TGCGCTCGGC ATCGAGCTGT CGCGCGTGCT GTGGAACCAT CTGCACGAGC AGGGCTACGT CGACGCGCAG GGCAAGGTGC TCGACCGGCT GAAGGATGCG CTGCGCCGGA GCGCGCTCGT GCTGCCGGAC GCGTTCGAGC CGCTGCGCGC GCCGATCGTC GCGACGCTGC GCAAGCTGTC GGGCCGCTTC GCGGTGCGCA ATGCCGACGA GCGCCGCGCG ATCGCGTTGC GGCGCGATGC ATCGGGCAAG GCCGTCGTGT TCGGCGAGGA TTTCCGCGCG TTGTGGGACC GCATCCGTCA TCGCACCGTG TACCGCGTCG AGTTCGACAA CGCGAAGCTG GTGCGCGACT GCACGGCCGC GTTGCGCGAC GCGCCGGACA TCGCACGGGC GCGGCTGCAG TGGCGCAAGG CCGAGATCGA CATCGGCAAG GCCGGCATCG AGGCGATCGA GGTGGCCGGC GCCGGCACGG TGCTGCTCGA CGAAGGCGAG TTGCCGCTGC CCGACCTGCT CACCGAGCTG CAGGACCGCA CGCAGCTCAC GCGCCGTTCG CTTGCGACGA TCCTCGCCGA CAGCGGCCGG CTCGACGATT TCCGCGTGAA TCCGCAGCAG TTCATCGCGG TCGCGGCCGA TGCGATCAAC CGCTGCAAGC GGCTCGCGCT CGTCGCGGGC ATCGCGTACC GCAAGCTCGG CGAGCGCCAC GTGCATGCGC TCGAATCGTT CGAGAGCGAA GCGCTGACCG GCTACCTGCG CAACCTGCGG CCGGACGCGC GCAAGTCGAT CCACGAAGCG GTCGTGTGCG AGACGGACGC CGAGCGCGCG TTCGCCGATG CGCTCGAAGC GCACGACGGC GTGAAGCTGT ACGCGAAGCT GCCGGCGTGG TTCCGCGTGC AGACGCCGCT CGGCAGCTAT CACCCCGACT GGGCCGTGCT CGCGGAACAG GACGGCGGCG AGCGGCTGTA CTTCGTCGTC GATACGCCGA ATGCCGATGG CCACGTGCCG AGCGAGCACG AACGCGCGAA GCTCGCGTGC GGCGAAGCGC ATTTCCGCGC GCTGGTCGAT GGCGACGGCG CGGCGCGCTT CGTGCGGGTC ACGCAGGCCG ATGCGTTGTT CGAGCCTGCG GCGCCGACGG CGGGCGCGGG GCGCTGA
|
Protein sequence | MRLHFEADLD YQREAIDAVC DLFRGQESYR GDFSVLANAA PGTTAAAQGS LGFAVSEQGV GNRLSLTDDA LARNLADVQL RGGLPPSGLP GSRDFTVEME TGTGKTYVYL RTIFELNRRY GFTKFVIVVP SIAIKEGVHK TLAITEDHFR ALYAGVPYDY FLYDSAKLGQ VRHFAASAAI QIMVMTVAAI NKKEINNLYK DSEKTGGEKP IDLIRATRPI VIVDEPQSVD GGLEGRGREA LAAMAPLCTL RYSATHVDRH HMVYRLDAVD AYERKLVKQI EIASAIVEDA HNKPYVRLVG VSNRRGAISA RVELDVATAA GVKRQIVSAT DGDDLERLTK RALYAGLRIG EVHAVKGAEY VELRHPEGEA FLSLGEAFGD IDTLAVQREM IRRTIREHLD KELRLAERGV KVLSLFFVDS VERYRRYDEN GMPVKGDYAL IFEEEYARAA RVPAYRALFD GVDVALEVER AHNGYFSIDR KGGWTDTSES SAAARENAER AYGLIMREKE ALLSFDTPLK FIFSHSALKE GWDNPNVFQI CTLRDIQTER ERRQTLGRGL RLAVDQDGER VRDAGVNTLT VIATERYESF AENLQKEIEA DTGIRFGIVE EHQFAALPVQ EDGGPAHALG IELSRVLWNH LHEQGYVDAQ GKVLDRLKDA LRRSALVLPD AFEPLRAPIV ATLRKLSGRF AVRNADERRA IALRRDASGK AVVFGEDFRA LWDRIRHRTV YRVEFDNAKL VRDCTAALRD APDIARARLQ WRKAEIDIGK AGIEAIEVAG AGTVLLDEGE LPLPDLLTEL QDRTQLTRRS LATILADSGR LDDFRVNPQQ FIAVAADAIN RCKRLALVAG IAYRKLGERH VHALESFESE ALTGYLRNLR PDARKSIHEA VVCETDAERA FADALEAHDG VKLYAKLPAW FRVQTPLGSY HPDWAVLAEQ DGGERLYFVV DTPNADGHVP SEHERAKLAC GEAHFRALVD GDGAARFVRV TQADALFEPA APTAGAGR
|
| |