Gene Bcen2424_0020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_0020 
Symbol 
ID4448815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp23185 
End bp23661 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content67% 
IMG OID639692027 
Productalkylhydroperoxidase 
Protein accessionYP_833667 
Protein GI116688044 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGCGA AACTCAATCC GTTTGCCGCC GCCCCCGCGC TGATGAAGAG CTGGATGACC 
GTGTCGGTCG CCGCGGCCGG GAGCCTCGAG CCGACGCTGA TCGAGCTGGT CAAGATCCGC
GCGTCGCAGA TCAACGCGTG CGCGAACTGC CTTAACATGC ACACCGTCGA GGCGCGCGAG
CAAGGCGAAA CCGAGCAGCG CATCTACCTG CTGTCCGCGT GGCGCGAAGC GCCCTGCTAC
ACCGACCGCG AACGCGCGGC GCTCGGCTGG ACCGAGGCGC TCACGCGGCT GTCGGAGGGC
CATGCGGCGC ACGAAGCGGC CTACGCGGCG CTGAACGACC ATTTCAGCGA GGAAGAACAG
GTGAAACTCA CGGTAATGAT CAACGTGATC AACGGCTGGA ACCGGCTCGC CGTCGGCTTC
GGGCTGTGGG TCGACCCGGC CGACGCGAAG GCCGCCGCCG CGAAGATGGT GGCTTGA
 
Protein sequence
MTAKLNPFAA APALMKSWMT VSVAAAGSLE PTLIELVKIR ASQINACANC LNMHTVEARE 
QGETEQRIYL LSAWREAPCY TDRERAALGW TEALTRLSEG HAAHEAAYAA LNDHFSEEEQ
VKLTVMINVI NGWNRLAVGF GLWVDPADAK AAAAKMVA