| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_0012 |
|---|
| Symbol | |
|---|
| ID | 4451109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 17949 |
|---|
| End bp | 18707 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639692018 |
|---|
| Product | putative transmembrane anti-sigma factor |
|---|
| Protein accession | YP_833659 |
|---|
| Protein GI | 116688036 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.237975 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCC CTCCGAACGA ACATGACCTT CAGGCCTATG TCGACGGCCA ACTCGACGAC
GATGCGCGCG CAGCGGTCGA GCGTTATCTC GCGCTGCATC CGGAGCGCGC GGAACAGGTG
AAGCAATGGC AGCAGGACGC GCAGCGGTTG CGGGCCGCGC TGGAGAGCGT GCGGATGCCG
GCCGATAACC CTGCGCTGGA TCCGGCCGCG ATTCGTGGCC GACGGGCCGA GCGCGCGCGG
ATGCGGTTCG CGATGGCGGC TTCGTTCGTG TTCTGCGTCG GGCTCGGGAC GTTCGGCGGA
TGGCAGGCGC GCGGGTGGAA CGCGCCGCCG CCCATCGCGC CGATGAGCGA TGCGGTCAAG
GCTTACCAGA TGATGGTGGT CGATCGGACG GCCAAGGTCG ATTACCGGCC GACCGGTGCG
GGCGATTTGC AGGGGTGGCT CACCAAAGGC GTGGGCGCAT CGGCGAAGCT GCCGGATTTG
AGCGCGGCGG GGTTCAGGCC GGTCGGTGGG CGGCTGTTCA CGACGGACAG CGGCGCTACT
GCTGCGATGG TGCTCTATCA GGATGACGCG GGACGGACGT TGAGCTTCTA TCTCCGGCCG
GCGGAATCGA AACATCGGCT GCTGCCGAAT GGGCAACGGG TGGATGGCGC GCTGCTGGCG
CGGTATGGCT CGGTGAACGG GCTCAACTAT GCGGTGGTCG GGCCGGCCGG GAGTCTCGGC
GAGAAGGCGG TCGTGCAGGC GCTCGATCAG CAGACTTGA
|
|---|
| Protein sequence | MNTPPNEHDL QAYVDGQLDD DARAAVERYL ALHPERAEQV KQWQQDAQRL RAALESVRMP
ADNPALDPAA IRGRRAERAR MRFAMAASFV FCVGLGTFGG WQARGWNAPP PIAPMSDAVK
AYQMMVVDRT AKVDYRPTGA GDLQGWLTKG VGASAKLPDL SAAGFRPVGG RLFTTDSGAT
AAMVLYQDDA GRTLSFYLRP AESKHRLLPN GQRVDGALLA RYGSVNGLNY AVVGPAGSLG
EKAVVQALDQ QT
|
|---|
| |