| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Arth_4083 |
|---|
| Symbol | ligC |
|---|
| ID | 4447673 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Arthrobacter sp. FB24 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008541 |
|---|
| Strand | - |
|---|
| Start bp | 4607100 |
|---|
| End bp | 4608191 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639691914 |
|---|
| Product | ATP-dependent DNA ligase |
|---|
| Protein accession | YP_833558 |
|---|
| Protein GI | 116672625 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1793] ATP-dependent DNA ligase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGTTA TGCAACTGCC GGTGATGCCC CCGATCGCGC CCATGCTCGC CAAAGCCGTC
AGCGCCCTGC CCGAAGTCCC GGATTCCGGC CCGAAATGGA GCTTTGAACC CAAGTGGGAC
GGCTTCCGGT CCATCATCTT CCGCGACGGC GACGAGGTGG AGATCGGCAG CCGCAACGGC
AAGCCCATGA CCCGCTACTT CCCCGAACTC GTAGAGGCGC TGAAGGCGAA CCTGCCGCCC
CGCTGCGTTC TGGACGGCGA AATCATCCTG GTGGGTGCCT CCGGTGACCG GCTGGACTTC
GAGGCGCTCC AGCAGCGGAT CCACCCCGCC GCCAGCCGGG TCAGGCTCCT CGCCGCCCAG
ACTCCGGCCA GCTTTGTGGC GTTCGACCTG CTGGCGCTCG ACGACGAGGA CCTCACCGGC
CGCCCGTTCT CGGAGCGGCG CAGCATGCTG GAGAAGGCCC TCGCGGGCAG TGCCGCGCCG
ATCCACCTGA CTTCCACCAC CCGGGACAAC GGCACAGCGC AGCAGTGGTT CCACAGGTTC
GAGGGCGCCG GACTCGACGG CATTGTGGCG AAGGCACTGG ACGGCAGCTA CCAGCCGGAC
AAACGCGTGA TGCTCAAGGT CAAGCACGAA CGCACGGCGG ACTGCGTCCT GGCCGGCTAC
CGCGTGCACA CCAGCGGACC GGACCGGATC GGTTCCCTGC TGCTGGGGCT CTACAACGGC
GACGGCCAGC TGGCCAGCGT GGGCGTGGTG GGCGCCTTCC CCATGCAGCG CCGCAAGGAC
CTGTTCGAGG AACTCCAGCC CCTGGTGACT GGCTTCGACG GCCACCCCTG GGCCTGGGCC
AAGCAGGAGG AAGGCAGCCG GACGCCGCGG AACGCCGAGG GCAGCCGGTG GAGCGCGGGC
AAGGACCTGT CCTTCATCCC GCTCCGGCCC GAGCGTGTGC TGGAAGTGAA ATACGACCAC
ATGGAGGGCG AACGGTTCCG GCACACGGCC CAGTTTGTCC GCTGGCGCCC CGACCGGGAC
CCTGCCTCCT GCACCTACGA GCAGCTGGAA GAGCCCGTCA AGTACGACCT CGCCGAGGTG
CTGGCCACCT AG
|
|---|
| Protein sequence | MGVMQLPVMP PIAPMLAKAV SALPEVPDSG PKWSFEPKWD GFRSIIFRDG DEVEIGSRNG
KPMTRYFPEL VEALKANLPP RCVLDGEIIL VGASGDRLDF EALQQRIHPA ASRVRLLAAQ
TPASFVAFDL LALDDEDLTG RPFSERRSML EKALAGSAAP IHLTSTTRDN GTAQQWFHRF
EGAGLDGIVA KALDGSYQPD KRVMLKVKHE RTADCVLAGY RVHTSGPDRI GSLLLGLYNG
DGQLASVGVV GAFPMQRRKD LFEELQPLVT GFDGHPWAWA KQEEGSRTPR NAEGSRWSAG
KDLSFIPLRP ERVLEVKYDH MEGERFRHTA QFVRWRPDRD PASCTYEQLE EPVKYDLAEV
LAT
|
|---|
| |