| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Arth_2926 |
|---|
| Symbol | |
|---|
| ID | 4444413 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Arthrobacter sp. FB24 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008541 |
|---|
| Strand | + |
|---|
| Start bp | 3295728 |
|---|
| End bp | 3296678 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639690749 |
|---|
| Product | type II secretion system protein |
|---|
| Protein accession | YP_832405 |
|---|
| Protein GI | 116671472 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4965] Flp pilus assembly protein TadB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.194464 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGCAA TGACACCTGC CATATTCGCT GTCGGCATGG TGCTCCTGGT CGGAGCAGTA
TTCGTTATTG TATTCGTGGT GTTCCGCCCA TCACACGGCT ATGTTGCGCT CAGCCGCAGA
CGGCCGTTCG GTGGTGCGGA ACGCTCCCCC TTGACAAAAT TCACTGACTC AACAGTGGGT
GCAGTGGAAC GGGTCCTCGC CGGGGGCAAC AAGTCCCCGG GTGAGCGGGC CACACTGGAT
CAGGCTGGCC TCAAGATAGC CCGCACAGAC TTCATCGTGT TGGTGGGTGC CACTGCTGTG
GTGGCCGGCT TCGTGGGCCT CATCCTCCAA GGACCCGTGT TCGCAGTGCT CTTCGCCGGC
CTTACTCCGA TCTTGGCTGC GATGTATTTG TCATTCCTGA CGCAGCGCCG ACGCGCCCGC
TTTGAGGCGC AACTCGGTGA CACCTTGACC ATGGTGTCCG GTGGTCTTCG AGCTGGTCAT
AGCGTTCTTC GTGCAATCGA TGCAGTGGCG CAGGAAGCCA GCGAACCCAC GGCCACGGAG
TTCTCCCGGG TCGTCAATGA AACCAGGCTG GGCCGCGACC TACAGGACTC ATTGAACGAC
GTATCACTGC GAATGAAGAG CGAGGACTTC AACTGGATGG CCCAGGCCAT CGAAATCAAC
CGGGAGGTCG GCGGAGACCT CGCTGAAGTG TTTGACCAGG TCGGCGAAAC AATCCGTGAG
CGCTCCCAGA TCAAGGGAAT GGTAAAGGCA CTGAGTGCAG AAGGAAAGCT TTCCGCAATC
ATCCTCATGG CGCTACCAGT ACTTCTGTTC ATCCTCATCG GGTTGGCCAA TCCCAAATAC
AGCGGCCAGC TAACCGGGCA TCCGATCGGC TGGATGATGC TAGGCATTGC CGTGGTGATG
ATGACCATCG GCGGTCTGTG GATCCGCAAG ATCAGCGATC TGAAATTCTA A
|
|---|
| Protein sequence | MIAMTPAIFA VGMVLLVGAV FVIVFVVFRP SHGYVALSRR RPFGGAERSP LTKFTDSTVG
AVERVLAGGN KSPGERATLD QAGLKIARTD FIVLVGATAV VAGFVGLILQ GPVFAVLFAG
LTPILAAMYL SFLTQRRRAR FEAQLGDTLT MVSGGLRAGH SVLRAIDAVA QEASEPTATE
FSRVVNETRL GRDLQDSLND VSLRMKSEDF NWMAQAIEIN REVGGDLAEV FDQVGETIRE
RSQIKGMVKA LSAEGKLSAI ILMALPVLLF ILIGLANPKY SGQLTGHPIG WMMLGIAVVM
MTIGGLWIRK ISDLKF
|
|---|
| |