| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Arth_1692 |
|---|
| Symbol | gltD |
|---|
| ID | 4445798 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Arthrobacter sp. FB24 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008541 |
|---|
| Strand | + |
|---|
| Start bp | 1888245 |
|---|
| End bp | 1889702 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639689513 |
|---|
| Product | glutamate synthase subunit beta |
|---|
| Protein accession | YP_831186 |
|---|
| Protein GI | 116670253 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
|---|
| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0179657 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCTGATC CACGCGGATT TCTGAAAGTA CGTCAGCGTG AAACCCAGCC GCGCCGTCCC
GTTCCCGTCC GCATCATGGA CTGGAAGGAA GTCTACGAGG CCCAGGAAAA GGGTGTCCTG
AAGAGCCAGG CCGGCCGCTG CATGGACTGC GGCGTACCGT TCTGCCATCA GGGCTGCCCG
CTGGGCAACC TGATTCCCGA GTGGAACGAC CTCGTGTGGC GGGACAAGGG CGAGGAAGCT
ATTGAGCGGC TGCATGCCAC CAACAACTTC CCGGAATTCA CCGGCCGCCT GTGTCCGGCA
CCCTGCGAGG CGTCCTGCGT GCTGGGGATC AACCAGCCCG CGGTGACCAT CAAGCAGGTT
GAAGTTTCCA TCATCGATCA AGCCTTCGAC AACGGCTGGG TCAACCCGCT GCCGCCGACC
CGCCTGACGG GCAAGACCGT GGCAGTGGTG GGCTCCGGCC CAGCCGGCCT GGCAGTTGCC
CAGCAGTTGA CGCGCGTGGG TCACACCGTT GCTGTGTACG AACGCGACGA CAAGATCGGC
GGCCTCCTGC GTTACGGCAT CCCCGACTTC AAGATGGAGA AGGAGCAGGT TGACCGCCGC
CTTGAGCAGA TGAAGGCCGA AGGCACCCGT TTCCGCACCG GAGTGGCCGT GGGCAGCGAC
GTGACCTGGG AGCAGCTCCG CCGGCGTTAC GACGCCGTGG TGGTTGCCAC CGGCGCTACC
GTGCCGCGCG ACCTGCCCAT TCCGGGTCGC GAGCTTGAGG GCGTCCACTT CGCCATGGAT
TACCTTGTTC CCGCCAACCG TGTGGTGGCG GGGGAGCAGG TGGAGAACCA GATCCACGCC
AAGGGCAAGC ATGTGGTGAT CCTGGGCGGC GGTGACACCG GCGCGGACTG CCTCGGCACT
GCACACCGCC ACGGCGCCGC GTCCGTGACC ACGCTGGCGA TCGGCAAGCA GCCGTCCGTG
GAACGCACCC CGAACCAGCC CTGGCCCACG TTCCCCACGC TTTTCGAGGT GGCGAGTGCG
CATGAAGAGG GTGGCGAGCG GACGTATCTG GCCTCCACGG TGGAGTTCGT CGGCGAAAAC
GGCAAGCTCA CCGGCGTGAA GGTTGCCGAG ACGGAATTCG TGGACGGCAA GCGACTCCCC
AAGGCGGGCA CCGAGCGGAT CATTCCCGCG GACCTGGTGT TCCTGTCCCT GGGCTTCACC
GGTGCGGAGC CGGCTGGCAT CACTGATCAG GTCCACGCCG AATTCGACGG CCGCGGCAAC
GTGGCGCGTG ACGGCTACTA CATGACGAAC ACCGAGGGTG TGTTCGTTGC CGGTGACGCC
GGCCGCGGAC AGTCGCTCAT CGTGTGGGCC ATCGCCGAAG GCCGCGCCTG TGCTGCGGCG
GTAGATAAAT TCCTGATGGG AACTACGATC CTGCCTGCCC CGGTTGCCCC AACCGACCGG
GCGATCGCCG TTCTCTAG
|
|---|
| Protein sequence | MADPRGFLKV RQRETQPRRP VPVRIMDWKE VYEAQEKGVL KSQAGRCMDC GVPFCHQGCP
LGNLIPEWND LVWRDKGEEA IERLHATNNF PEFTGRLCPA PCEASCVLGI NQPAVTIKQV
EVSIIDQAFD NGWVNPLPPT RLTGKTVAVV GSGPAGLAVA QQLTRVGHTV AVYERDDKIG
GLLRYGIPDF KMEKEQVDRR LEQMKAEGTR FRTGVAVGSD VTWEQLRRRY DAVVVATGAT
VPRDLPIPGR ELEGVHFAMD YLVPANRVVA GEQVENQIHA KGKHVVILGG GDTGADCLGT
AHRHGAASVT TLAIGKQPSV ERTPNQPWPT FPTLFEVASA HEEGGERTYL ASTVEFVGEN
GKLTGVKVAE TEFVDGKRLP KAGTERIIPA DLVFLSLGFT GAEPAGITDQ VHAEFDGRGN
VARDGYYMTN TEGVFVAGDA GRGQSLIVWA IAEGRACAAA VDKFLMGTTI LPAPVAPTDR
AIAVL
|
|---|
| |