| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Arth_1396 |
|---|
| Symbol | |
|---|
| ID | 4446102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Arthrobacter sp. FB24 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008541 |
|---|
| Strand | + |
|---|
| Start bp | 1555411 |
|---|
| End bp | 1557081 |
|---|
| Gene Length | 1671 bp |
|---|
| Protein Length | 556 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639689207 |
|---|
| Product | signal transduction histidine kinase regulating citrate/malate metabolism |
|---|
| Protein accession | YP_830890 |
|---|
| Protein GI | 116669957 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3290] Signal transduction histidine kinase regulating citrate/malate metabolism |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0792453 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACTCGAC GAAGAGGAAT GTCCCTCGCC GGGCAGTACC TGGTCCTGCA GTTGCTGATT
GTCCTGGCCG TCCTCGTCGC CGTCGTTGCC ATTTCGCTGG CCCAGTCGGC CGCCGCGTTT
GAGCGGATCG AGGGGCGCCG GGCACTGTCC GCGGCTGAGG CGCTGGGCAG CAATCCCGCC
GTTCGTGCGC TTCTTCCCTC GGCCGAACCG CGCGGCAGCG CGGCACTGTC CGCCGTCGCC
GAGTCGGTCC GCACCGTTTC CGGTTCCGCG CAGGTGGCAC TCGCCCGGTC TGACCGCACC
GTGGTGGCCT CGTCCGATCC TGGACTGCTC GGCCGGCCGT TGGAACTCGG TGCGAGCCGG
GTCATGGAAG GCCGGGCCTG GACCGGCGTG GTGGGCGGAA CGGCCACCCC CGTGCTTTCA
GCCCACGTGC CGGTCCTTGA CGACTCCGGG ACCATGATTG GCATTGCGTC CATCAGCCGG
AACTACCCGT CCACGTGGGA GCGCCTGGGG GATGCCGTCC CCAACCTGTT GACCTATCTG
GGAGTTGCCA GCGTCCTGGG TGTTGCCGGC TCCCTGCTGC TGTCCCGCAG GGTCAAGCGG
CAGACCCTCG GCATGGAGCC AAGCGAAATC TCGGGCCTGG TGGAGAACCG CGAAGCGATG
CTGCATGGAC TCAAGGAAGG CGTGGTGGCG CTGGACCTCC ACGGACGGAT TACCGTGGCC
AACGACAGCG CCCGGGCACT GTTGGGCCTG CCGGCGGACT GCGTGGGCAA AGATCTGGCC
GGACTGCCCG TTGAGCCGGC GCTCAAGGAA GTGCTGACCG GCGAGCAGCC CGGGCAGGAC
CAGATGGTGC TCGTGGGGGA GCGCCTGGTG GTGCTGAACC GGGTGCCGAT CCGTTCCAGG
GGCAGGGTGA TGGGTTCTGT CGCGACGTTG CGTGACCGGA CTGAGCTTTC GTCCCTGGAA
CGCGAACTGG GCACCACACG GACGGCAACG GACACGCTCA GGGCGCAGGC CCATGAATTC
GCCAACCAGC TGCACGTTAT TTCGGGGCTG ATCCAGATCG GCGAGTACGA TTCCGTCGTG
CAGTTCGTCA ACGGAGTCAC GGTGGACCGG ACGCGCCTGA ATGATGATGT GACCAGCCGC
ATCCAGGACC CGGCGCTCGC GGCACTGCTG ATCGCCAAAT CAAGCCTCGC GGCGGAACGC
GGCGTGCCGC TGCAACTGGA CCCCGCTTCG TCGCTGTCGC CGGTGGGCGA CGAGCTCTCG
CGTGACCTGA CCACCGTTGT GGGGAATCTC GTGGACAACG CACTCGACGC CGTCACGGGA
GCCGCCGAGG CATCGGTCCG GGTCCTCGTC GAGGATCGTC GCGAGGAAGT GGTCGTGACC
GTCCGGGACA CCGGGCCGGG CATTGACGGC GCGGCCGCCG ACGAGATCTT CCGGCAGGGA
TTCAGTACCA AGCAGCCCGG CCCGGCCGGC GGCCGGGGCT TTGGCCTGGC ACTCTCGCGG
GTGGTCTGCC GGCGTAGCGG CGGGGACCTT GCAGTGGCCA ACGACGGCGG GGCCGTCTTT
ACGGCGCGGC TGAAAAGGAA GCCGCTGAAA GGTACGCCGC TGAAAGGGAC GCCGGCAGAA
GGCGGGCCGG CACGCACGGC TCCGGCCACA GGAAAGGGGA CCCGGGCATG A
|
|---|
| Protein sequence | MTRRRGMSLA GQYLVLQLLI VLAVLVAVVA ISLAQSAAAF ERIEGRRALS AAEALGSNPA
VRALLPSAEP RGSAALSAVA ESVRTVSGSA QVALARSDRT VVASSDPGLL GRPLELGASR
VMEGRAWTGV VGGTATPVLS AHVPVLDDSG TMIGIASISR NYPSTWERLG DAVPNLLTYL
GVASVLGVAG SLLLSRRVKR QTLGMEPSEI SGLVENREAM LHGLKEGVVA LDLHGRITVA
NDSARALLGL PADCVGKDLA GLPVEPALKE VLTGEQPGQD QMVLVGERLV VLNRVPIRSR
GRVMGSVATL RDRTELSSLE RELGTTRTAT DTLRAQAHEF ANQLHVISGL IQIGEYDSVV
QFVNGVTVDR TRLNDDVTSR IQDPALAALL IAKSSLAAER GVPLQLDPAS SLSPVGDELS
RDLTTVVGNL VDNALDAVTG AAEASVRVLV EDRREEVVVT VRDTGPGIDG AAADEIFRQG
FSTKQPGPAG GRGFGLALSR VVCRRSGGDL AVANDGGAVF TARLKRKPLK GTPLKGTPAE
GGPARTAPAT GKGTRA
|
|---|
| |