| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Arth_0107 |
|---|
| Symbol | nhaA |
|---|
| ID | 4447440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Arthrobacter sp. FB24 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008541 |
|---|
| Strand | + |
|---|
| Start bp | 109469 |
|---|
| End bp | 110854 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639687902 |
|---|
| Product | pH-dependent sodium/proton antiporter |
|---|
| Protein accession | YP_829608 |
|---|
| Protein GI | 116668675 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3004] Na+/H+ antiporter |
|---|
| TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTTGT CGACTCAACG TTTAGGACGC TTCATGAGCC CCGCACCCAC GCCCGCCCCC
GACGCCAAAC CACGCACCGT CCTTGGCTAC GGCAGTTACG CCGAATCGCT GCGCATCGGT
GAGATCCTGC GCAAGGAAAC AGTCGGCGGC GCCCTCCTGG TGGCCGCTGC CGTCATCGCC
CTGATCTGGG CAAACTCGCC GGTCTCCGAC AGCTACTTCG CCTTGCGGGA CTACAAAATC
GGCTACGAAC CCTGGCATCT CGAGCTGAGC CTGGGCGCCT GGGCAGCCGA CGGACTGCTG
GCCATCTTCT TCTTCCTGGT TGGCCTCGAA CTGAAGCGTG AGTTCGTGGC AGGCGACCTC
CGCCAGCTCA ACAAATCGAT CGTGCCCGTG GCGGCCGCGG CCGGCGGCGT GCTTGTTCCC
GCGTTGATCT ACGCCGCCGT GAACATCTAC AGCCCGGAAA CCCTGCGCGG CTGGGCCATC
CCCACCGCAA CGGACATCGC GTTCGCCGTC GCGGTGCTGG CCATCATCGG CTCGCACCTG
CCCAGCGCCC TGCGCATCTT CCTGCTCACC CTGGCGGTGG TGGACGACCT CATCGCCATC
AGCATCATCG CGTTCTTCTA CTCCAGCGAC ATCCAGGCGG CCCCGCTGCT GCTCGCCCTC
ATCCCGCTTG CCCTGTACGC CTTCCTGGCC CAGAGGTACC GCCGCTTCTT CGGTGCCCAC
TTCATGGCTG CCTGGGCCAT CCTGCTGCCG CTCGGCATCG TCACCTGGGC ACTGGTGCAC
GCCTCCGGCA TCCACGCCAC GGTGGCCGGT GTCCTGCTCG GATTCGCCGT GCCGGTCCTT
CGGTCCAAGG CCAGCGGGGG TCCCGAAGCA GGCCCCGGCC TCGCGGAGAT CTTCGAACAC
CGGTTCCGTC CCATTTCCGC CGGCGTGGCC GTTCCCATCT TCGCCTTCTT CTCCGCCGGT
GTGGCCGTAG GCGGCTGGGA AGGCCTGGGT TCCGCCCTGG CTGACCCCGT GGCCATCGGC
ATCATCATGG CGCTCGTCCT CGGCAAGCCG ATCGGCATCA TGGGCACCAC CTGGATCCTC
ACCAAAGCCA CCAGGGCGCG GCTGGACGGA TCCTTCAAGT GGATCGATGT TTTTGGCGTC
TCGCTGCTGG CCGGAATCGG CTTCACCGTG TCCCTGCTCG TCGCGGAACT CAGCTTCGGC
CACGGCAGCC TGCACGATGA CCACGCCAAG GTGGGCATCC TGGCCGCATC GCTGCTCGCC
GCAATCCTGG CCACCGTGGT GCTGCGGGCC AGGAACCGCC AGTACCGCCG CGCGGAGGAA
CTCGAGAAGG TCGACTCGGA CCAGGACGGC ATCCCCGACG TCTACCAGCA CGAAAGCCGT
GGCTGA
|
|---|
| Protein sequence | MILSTQRLGR FMSPAPTPAP DAKPRTVLGY GSYAESLRIG EILRKETVGG ALLVAAAVIA
LIWANSPVSD SYFALRDYKI GYEPWHLELS LGAWAADGLL AIFFFLVGLE LKREFVAGDL
RQLNKSIVPV AAAAGGVLVP ALIYAAVNIY SPETLRGWAI PTATDIAFAV AVLAIIGSHL
PSALRIFLLT LAVVDDLIAI SIIAFFYSSD IQAAPLLLAL IPLALYAFLA QRYRRFFGAH
FMAAWAILLP LGIVTWALVH ASGIHATVAG VLLGFAVPVL RSKASGGPEA GPGLAEIFEH
RFRPISAGVA VPIFAFFSAG VAVGGWEGLG SALADPVAIG IIMALVLGKP IGIMGTTWIL
TKATRARLDG SFKWIDVFGV SLLAGIGFTV SLLVAELSFG HGSLHDDHAK VGILAASLLA
AILATVVLRA RNRQYRRAEE LEKVDSDQDG IPDVYQHESR G
|
|---|
| |