Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_1907 |
Symbol | rplC |
ID | 4437494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | - |
Start bp | 1768438 |
End bp | 1769064 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639677475 |
Product | 50S ribosomal protein L3 |
Protein accession | YP_821217 |
Protein GI | 116628598 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0087] Ribosomal protein L3 |
TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000032853 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAAAG GAATCTTAGG GAAAAAAGTG GGAATGACTC AAATCTTCAC TGAAGCAGGT GAATTTATCC CTGTTACTGT CATCGAAGCT ACTCCAAATG TTGTGCTTCA AGTTAAAACT GTTGAAACAG ACGGTTACGA AGCAGTTCAA GTTGGTTTTG ATGACAAACG TGAAGTATTA AGCAACAAAC CTGCCAAAGG CCACGTAGCG AAAGCTAACA CAGCTCCTAA GCGCTTCATT CGTGAATTCA AAAACATTGA AGGCTTAGAA GTTGGATCAG AAATCACTGT TGACATATTC GAAGCTGGAG ATATTGTTGA TGTAACTGGT ACTTCAAAAG GTAAAGGTTT CCAAGGTGTT ATCAAACGCC ACGGTCAATC ACGCGGACCT ATGGCTCACG GTTCTCGTTA CCACCGTCGT CCAGGTTCAA TGGGACCTGT AGCGCCTAAC CGTGTTTTCA AAAACAAACA CTTGGCAGGA CGTATGGGTG GCAACCGTGT GACAATTCAA AACCTTGAAA TTGTACAAGT TATCCCAGAG AAAAATGTTA TCCTTATCAA AGGTAACGTA CCAGGTGCTA AGAAATCTCT TATCACTATC AAATCAGCAG TTAAAACTGC TAAATAA
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Protein sequence | MTKGILGKKV GMTQIFTEAG EFIPVTVIEA TPNVVLQVKT VETDGYEAVQ VGFDDKREVL SNKPAKGHVA KANTAPKRFI REFKNIEGLE VGSEITVDIF EAGDIVDVTG TSKGKGFQGV IKRHGQSRGP MAHGSRYHRR PGSMGPVAPN RVFKNKHLAG RMGGNRVTIQ NLEIVQVIPE KNVILIKGNV PGAKKSLITI KSAVKTAK
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