Gene STER_1906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_1906 
SymbolrplD 
ID4437493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand
Start bp1767790 
End bp1768413 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content43% 
IMG OID639677474 
Product50S ribosomal protein L4 
Protein accessionYP_821216 
Protein GI116628597 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.35339e-07 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAACG TAAAACTATT TGACCAAACT GGTAAAGAAG TTAGCACAGT TGAACTTAAT 
GACGCTATCT TCGGTATCGA ACCAAACGAA TCAGTAGTAT TTGATGTCGT AATCAGCCAA
CGTGCTAGCC TTCGCCAAGG TACTCATGCG GTTAAAAACC GTTCAGCAGT ATCAGGTGGT
GGACGTAAAC CATGGCGTCA AAAAGGAACT GGACGTGCTC GTCAAGGTTC TATCCGCTCA
CCACAATGGC GTGGTGGTGG TGTTGTCTTC GGACCAACTC CACGTTCTTA CGGATACAAA
CTTCCACAAA AAGTTCGTCG CCTTGCATTG AAATCTGTAT ACTCAGCTAA AGTTGCAGAA
GATAAATTTG TAGCGGTTGA AGCTCTCTCA TTTGCGGCTC CAAAAACTGC TGAATTCGCA
AACGTTCTTT CAGCTCTTAG CATCGATTCT AAAGTACTTG TTATCGTTGA AGAAGGAAAC
AAATTCGCTG AACTTTCAGC ACGTAACCTT GCAAACGTAA CTGTTGCAAC TCCTGCAACT
GCAAGCGTAC TTGACATCGT AAACGCAGAT AAACTTCTTG TTACTAAAGA AGCTATCTCA
TCAATCGAGG AGGTTCTTGC ATAA
 
Protein sequence
MANVKLFDQT GKEVSTVELN DAIFGIEPNE SVVFDVVISQ RASLRQGTHA VKNRSAVSGG 
GRKPWRQKGT GRARQGSIRS PQWRGGGVVF GPTPRSYGYK LPQKVRRLAL KSVYSAKVAE
DKFVAVEALS FAAPKTAEFA NVLSALSIDS KVLVIVEEGN KFAELSARNL ANVTVATPAT
ASVLDIVNAD KLLVTKEAIS SIEEVLA