| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1906 |
|---|
| Symbol | rplD |
|---|
| ID | 4437493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | - |
|---|
| Start bp | 1767790 |
|---|
| End bp | 1768413 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 639677474 |
|---|
| Product | 50S ribosomal protein L4 |
|---|
| Protein accession | YP_821216 |
|---|
| Protein GI | 116628597 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0088] Ribosomal protein L4 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000335339 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAACG TAAAACTATT TGACCAAACT GGTAAAGAAG TTAGCACAGT TGAACTTAAT
GACGCTATCT TCGGTATCGA ACCAAACGAA TCAGTAGTAT TTGATGTCGT AATCAGCCAA
CGTGCTAGCC TTCGCCAAGG TACTCATGCG GTTAAAAACC GTTCAGCAGT ATCAGGTGGT
GGACGTAAAC CATGGCGTCA AAAAGGAACT GGACGTGCTC GTCAAGGTTC TATCCGCTCA
CCACAATGGC GTGGTGGTGG TGTTGTCTTC GGACCAACTC CACGTTCTTA CGGATACAAA
CTTCCACAAA AAGTTCGTCG CCTTGCATTG AAATCTGTAT ACTCAGCTAA AGTTGCAGAA
GATAAATTTG TAGCGGTTGA AGCTCTCTCA TTTGCGGCTC CAAAAACTGC TGAATTCGCA
AACGTTCTTT CAGCTCTTAG CATCGATTCT AAAGTACTTG TTATCGTTGA AGAAGGAAAC
AAATTCGCTG AACTTTCAGC ACGTAACCTT GCAAACGTAA CTGTTGCAAC TCCTGCAACT
GCAAGCGTAC TTGACATCGT AAACGCAGAT AAACTTCTTG TTACTAAAGA AGCTATCTCA
TCAATCGAGG AGGTTCTTGC ATAA
|
|---|
| Protein sequence | MANVKLFDQT GKEVSTVELN DAIFGIEPNE SVVFDVVISQ RASLRQGTHA VKNRSAVSGG
GRKPWRQKGT GRARQGSIRS PQWRGGGVVF GPTPRSYGYK LPQKVRRLAL KSVYSAKVAE
DKFVAVEALS FAAPKTAEFA NVLSALSIDS KVLVIVEEGN KFAELSARNL ANVTVATPAT
ASVLDIVNAD KLLVTKEAIS SIEEVLA
|
|---|
| |