Gene STER_1892 details

Gene Information

• Locus tag: STER_1892
• Symbol: rplF
• ID: 4437518
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptococcus thermophilus LMD-9
• Kingdom: Bacteria
• Replicon accession: NC_008532
• Strand: -
• Start bp: 1761589
• End bp: 1762125
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 639677460
• Product: 50S ribosomal protein L6
• Protein accession: YP_821202
• Protein GI: 116628583
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.0452279
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCACGTA TTGGTAATAA AGTAATTACT TTGCCTGCTG GTGTTGAAAT AACAAACAAC 
GATAACGTTG TTACTGTTAA AGGACCTAAA GGCGAACTCA CTCGTGAGTT TAACAAAAAC 
ATTGAAATCA AAGTTGAAGG CAACGAAGTT ACACTTCACC GTCCAAACGA CTCAAAAGAA 
AACAAAACAA TCCACGGCAC TTCACGTGCA AACTTGAACA ACATGGTTGT TGGTGTTTCT 
GAAGGTTTCA AAAAAGAACT TGAAATGCAC GGTGTAGGAT ACCGTGCTCA ACTCCAAGGA 
ACAAAACTTG TTCTTTCAGT TGGTAAATCT CACCAAGACG AAGTTGAAGC TCCAGAAGGC 
ATTACTTTTG AAGTTCCATC TGCAACTTCA ATTGTTGTTA GCGGTATCAA CAAAGAAGTT 
GTTGGTCAAA CAGCAGCTTA CATCCGTAGC CTTCGTTCTC CAGAACCTTA CAAAGGTAAA 
GGTATCCGTT ACGTTGGTGA ATACGTACGT CGTAAAGAAG GTAAAACTGG TAAATAA 

 

Protein sequence

MSRIGNKVIT LPAGVEITNN DNVVTVKGPK GELTREFNKN IEIKVEGNEV TLHRPNDSKE 
NKTIHGTSRA NLNNMVVGVS EGFKKELEMH GVGYRAQLQG TKLVLSVGKS HQDEVEAPEG 
ITFEVPSATS IVVSGINKEV VGQTAAYIRS LRSPEPYKGK GIRYVGEYVR RKEGKTGK