| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1797 |
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| Symbol | rplA |
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| ID | 4437596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptococcus thermophilus LMD-9 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008532 |
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| Strand | - |
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| Start bp | 1681106 |
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| End bp | 1681795 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 639677381 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_821124 |
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| Protein GI | 116628505 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00156418 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTAAAA AAAGCAAACA AATGCGTGCT GCTCTTGAGA AAATCGACAG CACAAAAGCT
TACAGCGTAG AAGAAGCTGT AGCTCTTGCA CAAGAAACTA ACTTCGCAAA ATTCGATGCT
ACTGTTGAAG TATCATACAA CCTTAACATC GATGTTAAGA AAGCTGACCA ACAAATCCGT
GGCGCAATGG TATTGCCAAA CGGTACTGGT AAAACTCAAC GCGTTCTTGT ATTTGCCCGT
GGTGCTAAAG CTGAAGAAGC TAAAGCAGCA GGTGCTGACT TCGTTGGTGA AGACGAACTC
GTTGATAAAA TCAACGGTGG ATGGCTTGAC TTTGACGTTG TTGTTGCAAC GCCAGACATG
ATGGCAATCG TTGGTCGTCT TGGACGTGTC CTTGGACCAC GTAACTTGAT GCCAAACCCT
AAAACTGGTA CGGTAACTAT GGACGTTGCT AAAGCAGTTG AAGAGTCTAA AGGTGGTAAA
ATCACTTACC GTGCTGATAA AGCAGGTAAC GTACAAGCTA TCATCGGTAA AGTTTCATTC
GAAGCTGAAA AATTGGTTGA AAACTTCAAA GCATTTAACG ATGCTATTCA AAAAGCTAAA
CCAGCTACAG CGAAAGGTGT TTACATCACA AACCTTTCAA TCACTACTAC ACAAGGTCCT
GGTATCAAAG TTGATCCTAA CTCATTGTAA
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| Protein sequence | MAKKSKQMRA ALEKIDSTKA YSVEEAVALA QETNFAKFDA TVEVSYNLNI DVKKADQQIR
GAMVLPNGTG KTQRVLVFAR GAKAEEAKAA GADFVGEDEL VDKINGGWLD FDVVVATPDM
MAIVGRLGRV LGPRNLMPNP KTGTVTMDVA KAVEESKGGK ITYRADKAGN VQAIIGKVSF
EAEKLVENFK AFNDAIQKAK PATAKGVYIT NLSITTTQGP GIKVDPNSL
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