| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1764 |
|---|
| Symbol | rpsL |
|---|
| ID | 4437630 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | - |
|---|
| Start bp | 1651031 |
|---|
| End bp | 1651444 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 639677350 |
|---|
| Product | 30S ribosomal protein S12 |
|---|
| Protein accession | YP_821099 |
|---|
| Protein GI | 116628480 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0048] Ribosomal protein S12 |
|---|
| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000016487 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTACAA TTAACCAATT GGTTCGTAAA CCACGTCAAT CAAAAGTTGT TAAATCTAAA
TCACCAGCTT TGAACGTTGG TTACAACAGC CACAAAAAAG TTCAAACTAA CGTATCTTCA
CCACAAAAAC GTGGTGTTGC AACACGTGTT GGAACAATGA CACCTAAAAA ACCTAACTCA
GCCCTTCGTA AATTTGCTCG TGTACGTTTG AGCAACCTTA TCGAAGTTAC TGCTTACATC
CCAGGTATCG GACACAACCT CCAAGAACAC AGCGTTGTTC TTATCCGTGG TGGACGTGTA
AAAGACCTTC CAGGGGTACG TTACCACATC GTCCGTGGTG CACTTGATAC TGCAGGTGTA
GCTGATCGTA AACAAAGCCG TTCTAAATAC GGTGCTAAAC GTCCTAAAGG GTAA
|
|---|
| Protein sequence | MPTINQLVRK PRQSKVVKSK SPALNVGYNS HKKVQTNVSS PQKRGVATRV GTMTPKKPNS
ALRKFARVRL SNLIEVTAYI PGIGHNLQEH SVVLIRGGRV KDLPGVRYHI VRGALDTAGV
ADRKQSRSKY GAKRPKG
|
|---|
| |