| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1749 |
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| Symbol | |
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| ID | 4438041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptococcus thermophilus LMD-9 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008532 |
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| Strand | + |
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| Start bp | 1636421 |
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| End bp | 1638103 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 639677337 |
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| Product | mRNA degradation ribonuclease J1/J2enzyme |
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| Protein accession | YP_821086 |
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| Protein GI | 116628467 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily |
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| TIGRFAM ID | [TIGR00649] conserved hypothetical protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.568373 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATCAA AAATCAATCT AAAACCTGAA GAAGTTGGGG TTTATGCGAT TGGTGGTTTG
GGAGAAATCG GTAAAAATAC CTATGGTATT GAATACCAGG ATGAAATCAT CATCGTCGAT
GCGGGTATTA AATTCCCTGA AGATGATCTT CTCGGTATCG ATTATGTCAT CCCGGACTAT
TCTTACATCG TTGAAAACGT TGACCGTGTT AAGGCTCTTG TCGTTACTCA CGGTCACGAA
GACCATATTG GTGGTATCCC CTTCCTTCTT AAACAGGCAA ATATCCCAAT CTATGCAGGA
CCACTTGCTC TTGCTCTTAT CAAAGGAAAA TTGGAAGAAC ACGGACTACT ACGTGATGCA
CAACTCTATG AAATTAACGC TGATACAGAG CTTACTTTCA AAAATATGAG CGTAACCTTC
TTCCGCACAA CTCACTCAAT TCCAGAACCT CTCGGAATTG TCATCCATAC ACCACAAGGT
AAAATTGTTT GTACCGGTGA CTTTAAGTTC GACCTCACTC CAGTAGGTGA GCCAGCAGAC
CTTCATCGTA TGGCTGCACT CGGTGAAGAA GGCGTTCTTT GCCTCCTCTC AGACTCAACC
AATGCTGAAG TCCCAACTTT CACTAATTCC GAGAAGGTCG TTGGACAATC CATCATGAAA
ATAATTGAAG GCATTCACGG ACGTATTATC TTCGCCTCAT TTGCCTCTAA TATTTTCCGT
CTTCAACAAG CTGCTGAGGC TGCTGTAAAA ACCGGTCGTA AGATTGTTGT CTTTGGACGT
TCTATGGAGA AAGCCATTGT TAATGGTGTT GAACTAGGCT ATATCAAAGT TCCAAAAGGA
ACTATTATTG ATCCTAGTGA AATGAAAAAC TATCATGCCA GTGAGATTCT TATCTTGTGT
ACCGGTTCTC AAGGGGAGCC TATGGCGGCC CTTGCACGTA TTGCCAATGG TATGCACCGA
CAAGTAACAC TACAACCTGG TGACACCGTT ATCTTCTCAT CTAGCCCTAT CCCAGGAAAT
ACAACCAGCG TTAACCGTTT GATTAATACC ATTCAAGAAG CGGGTGTAGA TGTTATTCAC
GGTAAAATCA ACAATATCCA TACCTCTGGT CACGGTGGTC AACAAGAGCA AAAACTAATG
CTTCGCTTGA TAAAACCAAA ATTCTTCATG CCTGTTCATG GTGAATACCG CATGCAAAAG
GTCCACGCAG ATCTCGCTGT TGATTGTGGT GTTCCGAAAG AGAATATCTT TATCATGGAA
AATGGTGATG TCTTAGCCCT AACAAAAGAT TCTGCTCGTC GTGCAGGTCA TTTCAATGCT
CAAGACATCT ATGTCGATGG TAATGGTATC GGTGATATTG GGGCGGCCGT TCTTCGTGAC
CGTCGTGATC TCTCTGGAGA TGGTGTCGTC CTTGCTGTCG CAACTGTTGA CTTCAATTCT
AAGATGATTC TAGCTGGTCC AGATATTCTC AGTCGTGGAT TTATCTATAT GCGTGAATCT
GGTGATCTTA TTCGTGATAG CCAACGCATT CTATTCAACG CTATTCGTAT TGCTCTTAAA
AATAAAGACG CCAGCATTCA ATCCGTTAAC GGAGCTATCG TCAATGCATT ACGACCATTC
CTATACGAAA AAACAGAACG TGAGCCAATT ATCATTCCCA TGATTCTCAC ACCTGATAAC
TAA
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| Protein sequence | MASKINLKPE EVGVYAIGGL GEIGKNTYGI EYQDEIIIVD AGIKFPEDDL LGIDYVIPDY
SYIVENVDRV KALVVTHGHE DHIGGIPFLL KQANIPIYAG PLALALIKGK LEEHGLLRDA
QLYEINADTE LTFKNMSVTF FRTTHSIPEP LGIVIHTPQG KIVCTGDFKF DLTPVGEPAD
LHRMAALGEE GVLCLLSDST NAEVPTFTNS EKVVGQSIMK IIEGIHGRII FASFASNIFR
LQQAAEAAVK TGRKIVVFGR SMEKAIVNGV ELGYIKVPKG TIIDPSEMKN YHASEILILC
TGSQGEPMAA LARIANGMHR QVTLQPGDTV IFSSSPIPGN TTSVNRLINT IQEAGVDVIH
GKINNIHTSG HGGQQEQKLM LRLIKPKFFM PVHGEYRMQK VHADLAVDCG VPKENIFIME
NGDVLALTKD SARRAGHFNA QDIYVDGNGI GDIGAAVLRD RRDLSGDGVV LAVATVDFNS
KMILAGPDIL SRGFIYMRES GDLIRDSQRI LFNAIRIALK NKDASIQSVN GAIVNALRPF
LYEKTEREPI IIPMILTPDN
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