| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1701 |
|---|
| Symbol | alr |
|---|
| ID | 4437664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | - |
|---|
| Start bp | 1591284 |
|---|
| End bp | 1592387 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639677291 |
|---|
| Product | alanine racemase |
|---|
| Protein accession | YP_821040 |
|---|
| Protein GI | 116628421 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0787] Alanine racemase |
|---|
| TIGRFAM ID | [TIGR00492] alanine racemase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGCGA GTTTACATCG ACCAACCTTG GCAAAGGTTG ATCTGTCAGC AATTTCAGAA
AATATTGAAC AAGTGGTTAG TCATATTCCT AAACAGGTGC AGACTTTTGC AGTTGTAAAG
GCCAATGCTT ATGGTCATGG CGCTGTTGAA GTGGCTAAAC ATGTGTCTAA GCAGGTGGAT
GGTTTTTGTG TTTCTAACCT AGATGAGGCG CTTGAACTTC GTCAAGCTGG CATAGAGCAA
CCGATACTTA TTTTGGGAGT AGTCTTGCCA GATGGTGTTC CCTTGGCTAT TCAAGAAAAC
ATTAGTCTGA CGGTGGCCTC ACTTGAGTGG TTGGCACTGG CTCAGAAACA AGGGCTTGAT
TTGATAGGTT TGACCTGTCA TATTAAGGTT GATTCAGGTA TGGGTCGTAT TGGGGTACGT
AACCTAAAGG ACGCAGATAA CTTGATTGCT GGTCTGAAGG CTCTTGGTGC TGATGTCGAA
GGTATTTTTA CTCATTTTGC AACAGCTGAT GAAGCAGATG ATAGTAAATT TAAGCGTCAA
TTATCTTTCT TCACCGATTT GGTGGATAAC TTGACTGATA GACCTCGCTT GGTGCACGCT
AGCAACTCAG CGACAAGTAT TTGGCATGCA GCAACCGTCT TTAATACGGT ACGTCTGGGT
GTTGTCATCT ATGGTCTCAA TCCTAGTGGC AGTGTCTTGG AACTTCCCTA TAATATTCAA
CCTGCCCTAA GTTTAGAGAC AGCTCTTATT CATGTTAAGA CCCTTCCAGC CGGTCAAGAC
GTGGGTTACG GTGCAACCTA TACAACTACG GCTGAAGAAG TTATTGGAAC GCTTCCGATT
GGCTATGCGG ATGGTTGGAC TAGAGATTTA CAAGGTTTCC ATGTTATTGT GGATGGACAA
CTTTGTCCTA TTGTTGGGCG TGTGTCTATG GACCAGATCA CTGTTCGCCT TCCTAAGGTT
TATCCACTAG GAACTCCAGT TACGCTTATG GGTGAAAATG GAGGAGCGAG CATTACTGCG
ACAGAGGTGG CTGAAAAGCG TGGCACAATC AACTACGAGG TCCTTTGTTT ACTTAGTGAT
CGTGTACCTC GTAGCTATGA CTAA
|
|---|
| Protein sequence | MIASLHRPTL AKVDLSAISE NIEQVVSHIP KQVQTFAVVK ANAYGHGAVE VAKHVSKQVD
GFCVSNLDEA LELRQAGIEQ PILILGVVLP DGVPLAIQEN ISLTVASLEW LALAQKQGLD
LIGLTCHIKV DSGMGRIGVR NLKDADNLIA GLKALGADVE GIFTHFATAD EADDSKFKRQ
LSFFTDLVDN LTDRPRLVHA SNSATSIWHA ATVFNTVRLG VVIYGLNPSG SVLELPYNIQ
PALSLETALI HVKTLPAGQD VGYGATYTTT AEEVIGTLPI GYADGWTRDL QGFHVIVDGQ
LCPIVGRVSM DQITVRLPKV YPLGTPVTLM GENGGASITA TEVAEKRGTI NYEVLCLLSD
RVPRSYD
|
|---|
| |