| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1590 |
|---|
| Symbol | gatB |
|---|
| ID | 4437768 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | - |
|---|
| Start bp | 1488021 |
|---|
| End bp | 1489463 |
|---|
| Gene Length | 1443 bp |
|---|
| Protein Length | 480 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 639677187 |
|---|
| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
|---|
| Protein accession | YP_820936 |
|---|
| Protein GI | 116628317 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
|---|
| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.453609 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTTG AAACAGTCAT CGGACTTGAA GTCCACGTTG AATTGAATAC AAACTCAAAA
ATTTTCTCAC CAACCTCTGC TCACTTTGGG AACGAACAAA ATACCAATAC TAATGTGATC
GACTGGTCTT TCCCAGGGGT ACTTCCTGTC TTGAACAAGG GTGTTGTGGA CGCTGGAATC
AAGGCCGCTT TGGCGCTGAA TATGGATATC CACCAGCACA TGCACTTTGA CCGTAAGAAC
TACTTCTATC CTGATAATCC AAAAGCCTAC CAAATTTCGC AATTTGACGA GCCAATCGGT
TATAACGGTT GGATTGAAGT GCAATTGGAA GACGGAACAA CTAAGAAAAT CGGGATTGAA
CGGGCTCACT TGGAAGAAGA TGCCGGTAAG AACACGCATG GAACAGACGG TTTCTCTTAT
GTTGACCTTA ACCGTCAAGG GGTGCCATTG ATCGAGATTG TATCTGAAGC CGATATGCGT
TCTCCTGAAG AAGCCTACGC TTATTTGACA GCTCTCAAAG AAGTCATCCA ATACACAGGC
ATTTCTGATG TCAAGATGGA AGAAGGATCT ATGCGTGTGG ATGCCAATAT TTCCCTTCGT
CCATATGGTC AAGAGGAATT TGGTACCAAG ACGGAGTTGA AAAACTTGAA CTCCTTCTCG
AATGTCCGCA AAGGTCTTGA ATACGAAGTG CAACGTCAAG CGAAAATCTT GCGCTCAGGT
GGTGTCATTC GTCAAGAAAC ACGCCGTTAT GATGAAGCCA GCAAGAGCAC AATCCTTATG
CGTGTCAAAG AAGGAGCAGC GGATTACCGT TACTTCCCAG AACCAGACCT TCCATTGTTT
GAAATCTCAG ATGAGTGGAT TGAGGAAATG CGTACGGAGT TACCAGAATT TCCAAAAGAC
CGCCGTGCTC GCTATGTGGC AGAACTTGGT TTGTCTGACT ATGATGCCAA CCAATTGACA
GCTACGAAGG TTACTTCTGA CTTCTTTGAA GCAGCCGTAG CCCTTGGTGG AGACGCCAAA
CAAGTCTCTA ACTGGCTTCA AGGTGAAGTC GCTCAGTTCT TGAACGCAGA AGGCAAAACG
CTTGAAGAAA TCCAATTGAC ACCCGAAAAC TTGGTAGAAA TGATTGCTAT CATCGAAGAT
GGCACCATCT CATCTAAGAT TGCCAAGAAA GTATTCGTTC ATTTGGCGAA AAACGGTGGC
GGTGCGCGTG AATACGTCGA AAAAGCTGGA TTGGTACAGA TTTCAGATCC TGAAGTCTTG
ATTCCAATCA TCCACCAAGT CTTTGCAGAT AATGAAGCAG CCATAGCCGA CTTCAAGTCA
GGTAAACGTA ATGCTGACAA GGCCTTCACA GGCTTCCTCA TGAAAGCAAC TAAAGGCCAA
GCAAACCCAC AAGTAGCCCT CAAGTTACTT GCCCAAGAAT TGGCTAAGTT GAAAGAAGAT
TGA
|
|---|
| Protein sequence | MNFETVIGLE VHVELNTNSK IFSPTSAHFG NEQNTNTNVI DWSFPGVLPV LNKGVVDAGI
KAALALNMDI HQHMHFDRKN YFYPDNPKAY QISQFDEPIG YNGWIEVQLE DGTTKKIGIE
RAHLEEDAGK NTHGTDGFSY VDLNRQGVPL IEIVSEADMR SPEEAYAYLT ALKEVIQYTG
ISDVKMEEGS MRVDANISLR PYGQEEFGTK TELKNLNSFS NVRKGLEYEV QRQAKILRSG
GVIRQETRRY DEASKSTILM RVKEGAADYR YFPEPDLPLF EISDEWIEEM RTELPEFPKD
RRARYVAELG LSDYDANQLT ATKVTSDFFE AAVALGGDAK QVSNWLQGEV AQFLNAEGKT
LEEIQLTPEN LVEMIAIIED GTISSKIAKK VFVHLAKNGG GAREYVEKAG LVQISDPEVL
IPIIHQVFAD NEAAIADFKS GKRNADKAFT GFLMKATKGQ ANPQVALKLL AQELAKLKED
|
|---|
| |