| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1461 |
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| Symbol | |
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| ID | 4437965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptococcus thermophilus LMD-9 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008532 |
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| Strand | + |
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| Start bp | 1367919 |
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| End bp | 1370129 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 639677066 |
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| Product | ABC-type amino acid transport system, periplasmic and permease components |
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| Protein accession | YP_820817 |
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| Protein GI | 116628198 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component
[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein
[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAA AACTTCTGAC ACTCTTTTTG AGTGTCATGT CAGCTCTCTT TGTTTTCGGA
GCTAAGGCAT CTGCTAGCAC GATTTCAGTA GTTTCAGATA CAGCCTATGC CCCATTTGAA
TTCAAAGACT CTGATCAGAC CTACAAGGGT ATCGATGTTG ATATTATCAA CGAAGTTGCC
AAACGTAAGA ATTGGGATGT TAACCAAACT TATCCTGGTT TTGATGCAGC CGTTAACGCA
GTTCAGTCAG GACAAGCAGA CGCCCTCATG GCAGGTACAA CTGTAACCGA TGCACGTAAG
AAGGTCTTCA CTTTTTCAGA CACTTATTAC GACACATCAA TTGTTATTTA CACTCGTAGC
AACGACAAAG TCAGCGACTA CAAACAATTG AAAGGTAAAA CAGTTGGTGT TAAAAATGGT
ACCGCCGCTC AAACCTGGCT TGATAAAAAC GCTAGCAAGT ATAGTTTCAC TGTTAAAACT
TTTGACACTA GTGACTTGAT GAACAACAGT TTGGACTCTG GTTCAGTTTA TGCAGCCATG
GACGACACAC CAGTTGTTCA ATATGCTATT GGTCAAGGTA AAGACTATGC TATCAACATA
AAGCCTGAAT CTATCGGTAG CTTCGCTTTC GCTGTAAAAA AAGGTGGAAA GCACGAAAGT
CTTATCAAGG ATTTCAATGA AGCCCTTAAG GAAATGAAGG AAGACGGCAC CTACGATGAA
ATCATGACCA AATGGTTGGG TGACTCGGCA AAAGCTTCTT CAAAATCTTC ATCGTCAAAA
CCGTCGGAAG CTCTTAACTT GACTGGTGAT GCTAATGCAA AAGCTACTCC TACTAAGGAA
ACTTACACCA TCTCAATGGA CTCATCGTTT GCACCATTTG AATATCAAAA TGGTTCTGGT
AAGTATGTTG GTATCGACGT TGACATCATC AATGCCATTG CTAAAAACCA AGGTTTCAAT
GTTAAATTAA CTAACCCTGG TTTCGATGCA TCACTTAATG CCGTTCAATC TAGCCAAGCC
GATGCGGTAT TGGCTGGTAT GACCATCACT GATGCCCGTA AACAAATCTT TGATTTCTCA
GATCCTTACT ACACTTCAAA CATTCGTTTA GCTGTGAAAA AAGGCTCTAA CATTAAGAAA
TACGAAGATC TCAAAGGTAA GACTGTTGGT GCCAAAAACG GAACATCTTC TTACTCTTGG
TTAGAAGAGA ATGCCGACAA ATATGGCTTC ACGCTTCGTG CATACGATGA AGCTTCTACT
ATGTATGATA GCTTGAACTC TGGTTCAATC GATTCCCTTA TGGATGATGA AGCCGTACTT
CTATACGCTA TCCAACAAGG ACGTAACTTT GAAACACCTA TTAAGGGAAT CTCTACTGGT
AAAGTTGGCT TTGCTGTTAA AAAAGGGGCT AACCCTGAGT TGATTGAAAT GTTCAACAAT
GGTTTAGCTG CTATTGTTAA AGACGGTACT TACGATAAGA TTATCAACAA ATACCTTGAC
AATAACAAAT CTAAAGAAAA GAGCTCAACC AATGTTGCCG ATGAAACTAC AATCGTAGGC
TTAATTAAAA ACAACTATAA ACAACTTCTC CAAGGTCTTG GAATTACCCT TGGATTGACC
CTTCTTTCAT TTGCTATTGC CATGATTATC GGTATTATCT TCGGTATGAT GGCAGTTGCA
CCAAACAAGA CCCTTCGTGT GATTTCACAA ATCTTTGTTG ACGTTGTCCG TGGTATTCCA
TTGATGATCG TTGCAGCCTT CATCTATTGG GGTATTCCGA ACTTGATTGA AAATATCACC
GGTCACCAGT CACCAATCAA TGACTTCGTG GCTGCGACTA TAGCCCTCTC ACTTAATGGT
GGTGCTTACA TTGCTGAAAT TGTGCGTGGT GGTATCGAAG CTGTCCCTAT TGGTCAGATG
GAAGCCAGCC GAAGCTTGGG TGTCCCATAC AATACAACAA TGCGTAAGAT CATCTTGCCA
CAGGCTGTTC GTTTGATGTT GCCAAACTTC ATCAACCAAT TTGTTATCTC ATTGAAAGAT
ACGACTATCG TATCAGCTAT CGGTTTGGTC GAACTCTTCC AAACTGGTAA AATCATCATT
GCTCGTAACT ACCAATCATT CCGTATGTAT GCGATTTTGG CCATCATTTA CTTGGTCATC
ATCACATGCT TGACGAAATT GGCTAAACGA CTAGAAAAGA GACTTAAATA A
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| Protein sequence | MKKKLLTLFL SVMSALFVFG AKASASTISV VSDTAYAPFE FKDSDQTYKG IDVDIINEVA
KRKNWDVNQT YPGFDAAVNA VQSGQADALM AGTTVTDARK KVFTFSDTYY DTSIVIYTRS
NDKVSDYKQL KGKTVGVKNG TAAQTWLDKN ASKYSFTVKT FDTSDLMNNS LDSGSVYAAM
DDTPVVQYAI GQGKDYAINI KPESIGSFAF AVKKGGKHES LIKDFNEALK EMKEDGTYDE
IMTKWLGDSA KASSKSSSSK PSEALNLTGD ANAKATPTKE TYTISMDSSF APFEYQNGSG
KYVGIDVDII NAIAKNQGFN VKLTNPGFDA SLNAVQSSQA DAVLAGMTIT DARKQIFDFS
DPYYTSNIRL AVKKGSNIKK YEDLKGKTVG AKNGTSSYSW LEENADKYGF TLRAYDEAST
MYDSLNSGSI DSLMDDEAVL LYAIQQGRNF ETPIKGISTG KVGFAVKKGA NPELIEMFNN
GLAAIVKDGT YDKIINKYLD NNKSKEKSST NVADETTIVG LIKNNYKQLL QGLGITLGLT
LLSFAIAMII GIIFGMMAVA PNKTLRVISQ IFVDVVRGIP LMIVAAFIYW GIPNLIENIT
GHQSPINDFV AATIALSLNG GAYIAEIVRG GIEAVPIGQM EASRSLGVPY NTTMRKIILP
QAVRLMLPNF INQFVISLKD TTIVSAIGLV ELFQTGKIII ARNYQSFRMY AILAIIYLVI
ITCLTKLAKR LEKRLK
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