Gene STER_1417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_1417 
Symbol 
ID4437999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand- 
Start bp1327175 
End bp1327813 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content36% 
IMG OID639677024 
ProductIS861, transposase (orf2), IS3 family, truncated 
Protein accessionYP_820775 
Protein GI116628156 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTAACC ACAAAAAAGT CCAATGCTTG ATGAAAGAAC TTGATTTGGC AGCCCGTATT 
CGTCGTAAAC GCAAGTATTC ATCTTACAAA GGTGAGATTG GCAAGAAAGC AGATAATTTC 
ATCCAACGAC AATTTGAAGC TTCAAAGCCC TACGAAAAAT GTTATACCGA TATCACAGAA 
TTTGCCATTC CAGTCAGTTC ACAAAAGCTA TATTTATCAC CGGTTTTAGA TGGCTATAAT 
AGCGAGATTA TCGCTTATCA GCTATCCACT TCACCGAATT TAGAACAAGT CAAAGCTATG 
TTAACACAAG CTTTTCCAGA AGAACATTAT GACCAGACGA TTCTTCACAG TGACCAAGGT 
TGGCAATATC AACACCAGTT TTATCATGAT TTTCTTAAGA AAAATGGAAT TCGTCCATCC 
ATGTCCCACA AGGGAAACAG TCCAGATAAC GGTATGATGG AATCTTTCTT TGGCATCTTA 
AAATCTGAAA TGTTTTATAG TTTTGAGAAA CAATTCAACT CACTTGACGA GCTCAAACAA 
TCCATTATCA ATTACATTGA TTATTACAAC AACAAACGCA TTAAAGTAAA ATTAAAAGGA 
CTTAGTCCTG TGCAGTACAG AACTAAATCC TTTCAATAA
 
Protein sequence
MINHKKVQCL MKELDLAARI RRKRKYSSYK GEIGKKADNF IQRQFEASKP YEKCYTDITE 
FAIPVSSQKL YLSPVLDGYN SEIIAYQLST SPNLEQVKAM LTQAFPEEHY DQTILHSDQG 
WQYQHQFYHD FLKKNGIRPS MSHKGNSPDN GMMESFFGIL KSEMFYSFEK QFNSLDELKQ 
SIINYIDYYN NKRIKVKLKG LSPVQYRTKS FQ