Gene STER_1348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_1348 
Symbol 
ID4438694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand+ 
Start bp1254918 
End bp1255592 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content33% 
IMG OID639676965 
Productpeptide ABC transporter ATPase 
Protein accessionYP_820718 
Protein GI116628099 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.926754 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAATC TCATTTTCGA CTCAGTCACA AAAATTTTTG GTGAGGGGGG TAGTAAGTAC 
GTAGCACTAG AAAATATTAA TTTCGAAGCA GAAAGCGGTC AGCTTATTTT AGTTGTAGGG 
CCATCAGGAT CAGGAAAAAC TACATTTTTG ACTATAGCAG GCGGACTACA GACACCAACT 
AATGGTGACG TAAAAATAAA TGACAGTACA ATTAACAGTT TGTCCAAAAA ACAACAAACA 
AAATTAAGAT TGGAAAAAAT AGGATTTATT TTACAATCTT ATAACTTAGT CCCATTTTTA 
ACGGTCGAAG AACAGTTTAA ATTCGTAGAT AAACTAAAAA AACAAAATTT GACTGAACAA 
AAATTGCATG AGCTTCTTTC TGATTTAGGA CTTTTAGAAC TGCTAAAAAA ATATCCTAAT 
CAACTTTCTG GTGGACAAAA GCAGCGTGTG GCAATTGCTA GAGCATTATA CACTGATCCT 
GACTATATTT TAGCAGATGA ACCCACAGCC GCATTAGATA CAGATAGATC CATGAAAGTA 
ATCGAGTTAC TCAGAGATTT AGCGCACAAA AGAAATAAAA TTATTATTGT AGTTACTCAT 
GACTTAAGGT TAAAAGATAT GGCAGACAAA GTTTATCAGA TAATTGACGG TAAAATGACA 
ATCCTGGAGA AGTAA
 
Protein sequence
MSNLIFDSVT KIFGEGGSKY VALENINFEA ESGQLILVVG PSGSGKTTFL TIAGGLQTPT 
NGDVKINDST INSLSKKQQT KLRLEKIGFI LQSYNLVPFL TVEEQFKFVD KLKKQNLTEQ 
KLHELLSDLG LLELLKKYPN QLSGGQKQRV AIARALYTDP DYILADEPTA ALDTDRSMKV 
IELLRDLAHK RNKIIIVVTH DLRLKDMADK VYQIIDGKMT ILEK