Gene STER_1313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_1313 
Symbol 
ID4437100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand
Start bp1219071 
End bp1220420 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content46% 
IMG OID639676933 
ProductNa+-driven multidrug efflux pump 
Protein accessionYP_820686 
Protein GI116628067 
COG category[V] Defense mechanisms 
COG ID[COG0534] Na+-driven multidrug efflux pump 
TIGRFAM ID[TIGR00797] putative efflux protein, MATE family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0190769 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGAAA CACATTCTCT CCGTGAGCGA TTTCTTGTTT TCTTCAAGAT TTTTGTGCCC 
ATACTAATCT ATCAGTTCGC CAACTTCTCG GCAGCCTTTG TGGACACTAC CATGACTGGT
CAATACGATG CCCTACACTT GGCGGGTGTA GCCATGGCAA CGAGTTTATG GAGTCCTTTT
TTTACCTTCT TAACAGGTAT CGTCTCTGCC TTGGTTCCGA TTATCGGGCA CCATCTAGGG
GCAGGTCGCA AGGATCGAGT AGCTCCAGAT TTCTATCAAT TTCTCTATAT GGCTTTAGGT
CTATCACTGA TCCTCTTTGC CCTCGTTTTT ATGGGGGCAC CCTTAGTTCT GGGACACTTA
GGTTTGGAAC CTGTGGTCAG AAAGGTAGCC CTTGGTTACC TACGCTTTTT GAGCCTTGGA
ATTATTCCCC TTCTGCTCTT TAGCGTGGTT CGCTCCTTTC TTGATGCGCT TGGCCTCACG
CGCCTTTCCA TGTACCTCAT GCTTTTGCTT CTACCACTAA ATGGTTTCTT CAATTTTCTC
CTCATCTATG GCATCGCTGG TCTACCAGAG TTGGGGGGAT CCGGAGCAGG TCTGGGAACT
TCATTGGCTT ACTGGGCTCT TTTCCTTATT TCCATCGCAG TTATCAGAAA GCATAAGAAA
GTTAAACCCT ACCAGATTGA AAAAATCCAA CCCCTTGATA AGACGGCTCT GCTTGATGCA
CTGAAACTAG GCCTCCCCAT TGGTGGAACG GTCTTTGCGG AGGTCTCCAT CTTCTCAGGC
GTTGGTCTAG TTATGGCTAA GTATCCATCC CTAGTCATTG CCAGTCATCA GGCGGCCATG
AATTTCTCAA ACCTCACGTA TGCCTTTCCT CTCAGTGTTT CCAGTGCAAT GGCTATCATT
ATTTCTTATG AATTTGGAGC TAAACGCATG GATGCGGTTA AGAGCTATAG CAAACTAGGA
CGTCTAACTG CCTTAGTTTT TGCTGGCTTT ACCTTGTTCT TTCTCTATTT CTTGAGATAT
GATTTAGCTG AACTCTATGG ACATGAACCT GAGTTTTTGA GAATGACAAC CGTTTTCATG
ACCTATAGCC TCTTCTTTCA AGTATCGGAT GCCTTTGCGG CTCCACTTCA AGGAATTCTG
CGTGGCTATA AGGACACCAA GGTCCCTTTC TATCTCGGTG TCTTGTCCTA CTGGGGCTTG
ACCTTTCCTG TTGGTTATCT TCTTGAAAAA GTTGCTGGAC TGGGTCCATA TAGTTACTGG
ATTGGCCTGA TTGCCAGTCT TATCGTCAGT GGTCTTTGTT ACCAATGGCG CCTAAATAGA
ATCGTCAAAC GCTACGAATC ACATCATTAA
 
Protein sequence
MHETHSLRER FLVFFKIFVP ILIYQFANFS AAFVDTTMTG QYDALHLAGV AMATSLWSPF 
FTFLTGIVSA LVPIIGHHLG AGRKDRVAPD FYQFLYMALG LSLILFALVF MGAPLVLGHL
GLEPVVRKVA LGYLRFLSLG IIPLLLFSVV RSFLDALGLT RLSMYLMLLL LPLNGFFNFL
LIYGIAGLPE LGGSGAGLGT SLAYWALFLI SIAVIRKHKK VKPYQIEKIQ PLDKTALLDA
LKLGLPIGGT VFAEVSIFSG VGLVMAKYPS LVIASHQAAM NFSNLTYAFP LSVSSAMAII
ISYEFGAKRM DAVKSYSKLG RLTALVFAGF TLFFLYFLRY DLAELYGHEP EFLRMTTVFM
TYSLFFQVSD AFAAPLQGIL RGYKDTKVPF YLGVLSYWGL TFPVGYLLEK VAGLGPYSYW
IGLIASLIVS GLCYQWRLNR IVKRYESHH