Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_1313 |
Symbol | |
ID | 4437100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | + |
Start bp | 1219071 |
End bp | 1220420 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639676933 |
Product | Na+-driven multidrug efflux pump |
Protein accession | YP_820686 |
Protein GI | 116628067 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0190769 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACGAAA CACATTCTCT CCGTGAGCGA TTTCTTGTTT TCTTCAAGAT TTTTGTGCCC ATACTAATCT ATCAGTTCGC CAACTTCTCG GCAGCCTTTG TGGACACTAC CATGACTGGT CAATACGATG CCCTACACTT GGCGGGTGTA GCCATGGCAA CGAGTTTATG GAGTCCTTTT TTTACCTTCT TAACAGGTAT CGTCTCTGCC TTGGTTCCGA TTATCGGGCA CCATCTAGGG GCAGGTCGCA AGGATCGAGT AGCTCCAGAT TTCTATCAAT TTCTCTATAT GGCTTTAGGT CTATCACTGA TCCTCTTTGC CCTCGTTTTT ATGGGGGCAC CCTTAGTTCT GGGACACTTA GGTTTGGAAC CTGTGGTCAG AAAGGTAGCC CTTGGTTACC TACGCTTTTT GAGCCTTGGA ATTATTCCCC TTCTGCTCTT TAGCGTGGTT CGCTCCTTTC TTGATGCGCT TGGCCTCACG CGCCTTTCCA TGTACCTCAT GCTTTTGCTT CTACCACTAA ATGGTTTCTT CAATTTTCTC CTCATCTATG GCATCGCTGG TCTACCAGAG TTGGGGGGAT CCGGAGCAGG TCTGGGAACT TCATTGGCTT ACTGGGCTCT TTTCCTTATT TCCATCGCAG TTATCAGAAA GCATAAGAAA GTTAAACCCT ACCAGATTGA AAAAATCCAA CCCCTTGATA AGACGGCTCT GCTTGATGCA CTGAAACTAG GCCTCCCCAT TGGTGGAACG GTCTTTGCGG AGGTCTCCAT CTTCTCAGGC GTTGGTCTAG TTATGGCTAA GTATCCATCC CTAGTCATTG CCAGTCATCA GGCGGCCATG AATTTCTCAA ACCTCACGTA TGCCTTTCCT CTCAGTGTTT CCAGTGCAAT GGCTATCATT ATTTCTTATG AATTTGGAGC TAAACGCATG GATGCGGTTA AGAGCTATAG CAAACTAGGA CGTCTAACTG CCTTAGTTTT TGCTGGCTTT ACCTTGTTCT TTCTCTATTT CTTGAGATAT GATTTAGCTG AACTCTATGG ACATGAACCT GAGTTTTTGA GAATGACAAC CGTTTTCATG ACCTATAGCC TCTTCTTTCA AGTATCGGAT GCCTTTGCGG CTCCACTTCA AGGAATTCTG CGTGGCTATA AGGACACCAA GGTCCCTTTC TATCTCGGTG TCTTGTCCTA CTGGGGCTTG ACCTTTCCTG TTGGTTATCT TCTTGAAAAA GTTGCTGGAC TGGGTCCATA TAGTTACTGG ATTGGCCTGA TTGCCAGTCT TATCGTCAGT GGTCTTTGTT ACCAATGGCG CCTAAATAGA ATCGTCAAAC GCTACGAATC ACATCATTAA
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Protein sequence | MHETHSLRER FLVFFKIFVP ILIYQFANFS AAFVDTTMTG QYDALHLAGV AMATSLWSPF FTFLTGIVSA LVPIIGHHLG AGRKDRVAPD FYQFLYMALG LSLILFALVF MGAPLVLGHL GLEPVVRKVA LGYLRFLSLG IIPLLLFSVV RSFLDALGLT RLSMYLMLLL LPLNGFFNFL LIYGIAGLPE LGGSGAGLGT SLAYWALFLI SIAVIRKHKK VKPYQIEKIQ PLDKTALLDA LKLGLPIGGT VFAEVSIFSG VGLVMAKYPS LVIASHQAAM NFSNLTYAFP LSVSSAMAII ISYEFGAKRM DAVKSYSKLG RLTALVFAGF TLFFLYFLRY DLAELYGHEP EFLRMTTVFM TYSLFFQVSD AFAAPLQGIL RGYKDTKVPF YLGVLSYWGL TFPVGYLLEK VAGLGPYSYW IGLIASLIVS GLCYQWRLNR IVKRYESHH
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