Gene STER_1290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_1290 
Symbol 
ID4436929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand
Start bp1198824 
End bp1199426 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content48% 
IMG OID639676913 
ProductDNA-binding response regulator 
Protein accessionYP_820666 
Protein GI116628047 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.29796 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAT TAGTCGCCGA AGACCAGTCA ATGTTGAGGG ATGCACTCTG CCAACTCCTC 
ATGTTGGAAG ACGATGTCGA AGAGGTCCAT GCGGCCAGTG ATGGCCAAGA AGCCATTACT
CTCTTGGAAA AAGAGGAAGT CGACGTAGCC ATTTTAGACA TTGAAATGCC AGTTAAAACA
GGACTGGATG TTCTTGAGTG GATTCGAGCC AACCAAAGAG AAACAAAGGT TGTTATAGTA
ACCACCTTCA AACGAAAAGG CTATTTCAAA CGAGCCCTGG CAGCCCACGT GGATGCCTAT
GTACTGAAAG AGCGTTCCAT CAGTGACCTC ATGGCGACCA TCCATACCGT CCTAGCAGGC
CAAAAGGAGT ACTCGCCAGA GCTAGTTGAA GGTGTCGCCT TTGATAATAA TCCACTCAGT
CAACGTGAAC AAGAAGTCCT GGCCATGGTT GCCCAGGGGT CAACCAACCA AGAAATCGCC
GAAAGCCTCT TCCTCTCAAA TGGAACAGTT CGAAATTACA TGACAGCCAT CCTAACCAAA
CTCGATGCAG GCAACCGAAC AGAAGCTGTC CGCATTGCCA AAGAAAAAGA CTGGTTGGGA
TGA
 
Protein sequence
MKLLVAEDQS MLRDALCQLL MLEDDVEEVH AASDGQEAIT LLEKEEVDVA ILDIEMPVKT 
GLDVLEWIRA NQRETKVVIV TTFKRKGYFK RALAAHVDAY VLKERSISDL MATIHTVLAG
QKEYSPELVE GVAFDNNPLS QREQEVLAMV AQGSTNQEIA ESLFLSNGTV RNYMTAILTK
LDAGNRTEAV RIAKEKDWLG