Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_1255 |
Symbol | |
ID | 4437779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | - |
Start bp | 1161055 |
End bp | 1161816 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639676883 |
Product | sortase (surface protein transpeptidase) |
Protein accession | YP_820636 |
Protein GI | 116628017 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3764] Sortase (surface protein transpeptidase) |
TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.20645 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAAG ATAACAAAAA TAAGACTCCT AAAAAGCATC GTAAATGGCT TGAGGTCCTT CGTTGGATCT TGATTGTTGT TCTCTTGGTT GTTGGTTTAG CTTTAATTTT TAATAAATCA ATTCGAAACA CTATAATTGC TTGGAATACT AATAAATATC AAGTAAGTAA GGTCTCTAAA AAGACCATAA AGAAAAACAA GGAAGCTAAG GCAAGTTATG ACTTTGATAC GGTTAAATCT GTTAGTACAG AGTCAGTCTT GCAAGCCCAG ATGGGTTCTC AAAAACTTCC AGTTGTTGGT GGAATTGCTA TCCCTGAGGT TGGTATTAAT CTCCCTATTT TCAAAGGACT TGGTAATACA GAGCTTACCT ATGGTGCTGG AACTATGAAG GAAAATCAAG TCATGGGTGG AGAAAATAAT TATTCATTGG CTAGTCACCA TATTTTCGGT ATCGCTGGGG CTTCTGATAT GCTCTTCTCA CCATTAGACA GAGCAAAAAA TGGCATGAAG ATTTATCTTA CGGATAAAAA TAAGATCTAC ACCTATGTTA TCAGTGAGGT AAAAATTGTC CAACCAACTG AAGTAGCAGT GGTTGATGAC ACTCCTGGTA AATCTGAAGT GACTTTGGTA ACTTGTACAG ATGCTGAAGC AACTCAGCGT ACAATTGTCA AAGGGAACTT AGAATCGCAG GTAGACTTTG ACAAGGCAAG TTCAGATATT CTTGAAGCCT TCAATAAGTC ATACAATCAA TTTCAAAGTT AA
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Protein sequence | MRKDNKNKTP KKHRKWLEVL RWILIVVLLV VGLALIFNKS IRNTIIAWNT NKYQVSKVSK KTIKKNKEAK ASYDFDTVKS VSTESVLQAQ MGSQKLPVVG GIAIPEVGIN LPIFKGLGNT ELTYGAGTMK ENQVMGGENN YSLASHHIFG IAGASDMLFS PLDRAKNGMK IYLTDKNKIY TYVISEVKIV QPTEVAVVDD TPGKSEVTLV TCTDAEATQR TIVKGNLESQ VDFDKASSDI LEAFNKSYNQ FQS
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