| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1188 |
|---|
| Symbol | |
|---|
| ID | 4438284 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | - |
|---|
| Start bp | 1095764 |
|---|
| End bp | 1096462 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 639676821 |
|---|
| Product | DNA replication protein dnaD |
|---|
| Protein accession | YP_820574 |
|---|
| Protein GI | 116627955 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3935] Putative primosome component and related proteins |
|---|
| TIGRFAM ID | [TIGR01446] DnaD and phage-associated domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.130151 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTTT TTGAACAGTA TCGAACAGGA AATCTAGTCC TTCCAAATGC CTTATTTTTT
CACTTTAAGG ATATTTTTCC ATCAGCGGAT GACTTTTTAG TTTGGCAGTT TCTCTATCTA
CAAACGACTA CTCAGATTGG AGAAGTGGCC TCTAGCCAGA TAGCGCAGGC AACTGGAAAG
ACCCCCACTG AGGTTAATAA AAGTATTACG ACATTAACTG AGGCCGGACT CCTTGATTTT
ACGACTGTTA AAGTTAATAA TGAAATTAAG ATGGTTGTTG ATGCTTCACC TGCCCTAGCA
GTGTTAGACA AGCTAGTGAG TAGTGAAAAT TCAACGACAG GTCCTGTTGC TGGCCAACCA
ACAAATACAC AGCTTATTAA ACAATTGACA GATGAGTTGG AACAGGCTTT GGGAATCTTG
AATCCTATGG TAATAGAAGA TTTAAATAAG GAAATTCAGG AAGAACACAC TGACCCGGAA
TTAATCCGTG AAGCTCTGAA AGAGGCAGTA TTTAACCGAA AAACCAACTG GAATTATATC
AAAGGGGTTC TTCGTAACTG GAAATTAAGT GGTATTACTA CTAAAATTCA AGTTGAAGAA
CGTCGTTTGG AGCATCAAGG AAAGAAACAA CATCATCAGG TTTCGGATGA GTTCAAAACT
GGTATGGACG CGGCCCGTCA ATTGTGGGGT GGTCAATAA
|
|---|
| Protein sequence | MSFFEQYRTG NLVLPNALFF HFKDIFPSAD DFLVWQFLYL QTTTQIGEVA SSQIAQATGK
TPTEVNKSIT TLTEAGLLDF TTVKVNNEIK MVVDASPALA VLDKLVSSEN STTGPVAGQP
TNTQLIKQLT DELEQALGIL NPMVIEDLNK EIQEEHTDPE LIREALKEAV FNRKTNWNYI
KGVLRNWKLS GITTKIQVEE RRLEHQGKKQ HHQVSDEFKT GMDAARQLWG GQ
|
|---|
| |