Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_1180 |
Symbol | |
ID | 4438276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | - |
Start bp | 1090376 |
End bp | 1090822 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639676813 |
Product | transcriptional repressor protein, putative |
Protein accession | YP_820566 |
Protein GI | 116627947 |
COG category | [K] Transcription |
COG ID | [COG1438] Arginine repressor |
TIGRFAM ID | [TIGR01529] arginine repressor |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000314701 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAGA AAGATCGTTT GGAGTTAATC CGAAAGATTG TCCAAGAAAA TAAAATTACG ACCCAGAAAG AATTGGTAAG ATTACTCCAG GCTGAGGGGT TGAAGGCTAC TCAGGCTACG GTATCACGTG ATATCAATGA AATTGGTATT ACCAAAGTGC CAACCGAAGA TGGTTCGTAC ATCTATGGGC TCTCAACTGC TCCTAGACGA GTAGGTAGAT CTTCTGTTGC TTGTCGCCGC TTGTTGCGTA TTGATAGACA ACATGCCTTT ATGAATATCT TAGTTCAGCC AGGGACTAGT CGTCTCATCA AAAAGATTCT TTTGGATGAA TACAAGCATT TGATTTTTAG CTTGATTGCT GATGATGACA CGCTCTTTTT GGTTGCTCAG TCAGAATTAG CAGCTATCGA ATTACATGGA CAAATCGTCA AGTGGGTTGA AGAATAG
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Protein sequence | MKKKDRLELI RKIVQENKIT TQKELVRLLQ AEGLKATQAT VSRDINEIGI TKVPTEDGSY IYGLSTAPRR VGRSSVACRR LLRIDRQHAF MNILVQPGTS RLIKKILLDE YKHLIFSLIA DDDTLFLVAQ SELAAIELHG QIVKWVEE
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