Gene STER_1180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_1180 
Symbol 
ID4438276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand
Start bp1090376 
End bp1090822 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content41% 
IMG OID639676813 
Producttranscriptional repressor protein, putative 
Protein accessionYP_820566 
Protein GI116627947 
COG category[K] Transcription 
COG ID[COG1438] Arginine repressor 
TIGRFAM ID[TIGR01529] arginine repressor 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000314701 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAGA AAGATCGTTT GGAGTTAATC CGAAAGATTG TCCAAGAAAA TAAAATTACG 
ACCCAGAAAG AATTGGTAAG ATTACTCCAG GCTGAGGGGT TGAAGGCTAC TCAGGCTACG
GTATCACGTG ATATCAATGA AATTGGTATT ACCAAAGTGC CAACCGAAGA TGGTTCGTAC
ATCTATGGGC TCTCAACTGC TCCTAGACGA GTAGGTAGAT CTTCTGTTGC TTGTCGCCGC
TTGTTGCGTA TTGATAGACA ACATGCCTTT ATGAATATCT TAGTTCAGCC AGGGACTAGT
CGTCTCATCA AAAAGATTCT TTTGGATGAA TACAAGCATT TGATTTTTAG CTTGATTGCT
GATGATGACA CGCTCTTTTT GGTTGCTCAG TCAGAATTAG CAGCTATCGA ATTACATGGA
CAAATCGTCA AGTGGGTTGA AGAATAG
 
Protein sequence
MKKKDRLELI RKIVQENKIT TQKELVRLLQ AEGLKATQAT VSRDINEIGI TKVPTEDGSY 
IYGLSTAPRR VGRSSVACRR LLRIDRQHAF MNILVQPGTS RLIKKILLDE YKHLIFSLIA
DDDTLFLVAQ SELAAIELHG QIVKWVEE