Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_1171 |
Symbol | |
ID | 4438654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | - |
Start bp | 1081831 |
End bp | 1083393 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639676805 |
Product | 2-isopropylmalate synthase |
Protein accession | YP_820558 |
Protein GI | 116627939 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0051552 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTAAAG TGGAGTTTCT TGATACAAGC CTTCGAGATG GGGAACAAAC ACCAGGTGTT AACTTCTCAA TCAAAGAAAA AGTTGCTATT GCAAAGCAAC TTGAAAAATG GGGAATTTCT TCAATCGAAG CTGGTTTCCC TGCAGCTAGT CCAGATTCAT TTGAGGCTGT AAAACAAATT TCAGCTGCTA TGACTACTAC AGCAGTTTCT GGTTTGGCTC GTTCTGTAAA GTCTGATATT GATGCTTGTT ATGAAGCTAT TAAGGATGCA AAATTCCCAC AATGTCATGT CTTTATTGCA ACAAGTCCTA TTCATCGTGA ATTTAAGTTG AAGAAATCAA AAGAAGAAAT TCTTGAGATT ATCAAAGAAC ATGTGACTTA TGCGCGTGAA CGTTTTGATG TTGTTGAGTT TTCACCTGAA GATGCTACTC GTACAGAGCT CGATTATCTC TTGGAAGTTG TTCAAACAGC AGTTGATGCC GGTGCGACTT ATATTAATAT TCCGGATACA GTGGGTTTTA CAACTCCTGA AGAGTTCGGT CATATTTTCA AATATCTCAT TGAAAATGTT AAATCAGATC GTGAAATTAT CTTTAGTCCT CACTGTCACA ATGACCTTGG TATGGCTGTA GCTAACACAC TTGCAGCTAT TAAAAATGGT GCTGGCCGTG TTGAAGGAAC TGTGAATGGT ATCGGTGAAC GTGCCGGAAA TGCAGCGCTT GAAGAAGTGG CAGTGGCACT TAATATCCGT GAAGACTACT ATCAAGCAAC AAGTGATATT GTGCTTAATG AGACAGTCAA CACTGCTGAA CTTGTATCTC GATATTCAGG TATCGCTATT CCTAAGAATA AAGCTGTTGT TGGTGGGAAT GCCTTTTCTC ATGAATCTGG TATCCACCAA GATGGTTTCC TTAAAAATCC TCTTACTTAT GAAATCATTA CACCCGAGTT GGTTGGGGTT AAGAAAAGCT CACTTCCACT TGGTAAATTG TCAGGTCGCC ATGCCTTTAT TGAAAAATTG AAAGAACTTG AGCTTGACTT TGTTGAAGAA GATATCAAAC CACTCTTTGC TAAATTCAAG CGCTTGGCTG ATAAAAAACA TGAAATTACT GATGCTGATA TTCGTGCACT TGTTGCTGGG ACTAATGTTG AAAATCCAGA AGGCTTCCAT TTCCAAGATC TTCGCTTGAC AACTAATCCT GATGAAACAA TTACTGCTGC AGTTAGCTTG GTAAATGAAG ACGGGGAAGC TGTAGAATTT TTGGCAAATG GCCAAGGATC AGTTGAAGCT ATCTTCAATG CTATCGATAA GTTCTTCAAT CAAACAGTCC GCTTGATTTC TTATAATATC GATGCCATAA CTGATGGTAT TGATGCCCAA GCACGTGTAC TTGTATCTGT AGAAAATGTG GACACAGATA CAATCTTCAA CGCTTCAGGT TTGGATTTTG ACGTCTTGAA AGCTTCAGCA ATTGCATATA TTAATGCGAA TACGCTGGTT CAAAAAGAAA ATGCTGGTGA GATGGCACGA AAAGTTTCTT ACCGTGACCT TCCACAAACT TAA
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Protein sequence | MRKVEFLDTS LRDGEQTPGV NFSIKEKVAI AKQLEKWGIS SIEAGFPAAS PDSFEAVKQI SAAMTTTAVS GLARSVKSDI DACYEAIKDA KFPQCHVFIA TSPIHREFKL KKSKEEILEI IKEHVTYARE RFDVVEFSPE DATRTELDYL LEVVQTAVDA GATYINIPDT VGFTTPEEFG HIFKYLIENV KSDREIIFSP HCHNDLGMAV ANTLAAIKNG AGRVEGTVNG IGERAGNAAL EEVAVALNIR EDYYQATSDI VLNETVNTAE LVSRYSGIAI PKNKAVVGGN AFSHESGIHQ DGFLKNPLTY EIITPELVGV KKSSLPLGKL SGRHAFIEKL KELELDFVEE DIKPLFAKFK RLADKKHEIT DADIRALVAG TNVENPEGFH FQDLRLTTNP DETITAAVSL VNEDGEAVEF LANGQGSVEA IFNAIDKFFN QTVRLISYNI DAITDGIDAQ ARVLVSVENV DTDTIFNASG LDFDVLKASA IAYINANTLV QKENAGEMAR KVSYRDLPQT
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