| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1117 |
|---|
| Symbol | |
|---|
| ID | 4437351 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | + |
|---|
| Start bp | 1032360 |
|---|
| End bp | 1033127 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 639676752 |
|---|
| Product | ABC-type polar amino acid transport system, ATPase component |
|---|
| Protein accession | YP_820506 |
|---|
| Protein GI | 116627887 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000186599 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTTA TCGAATTTAA AAATGTCAAT AAATATTACG GAGACTATCA TGCTCTTCGT
GATATCAATT TAGAAATTGA AAAAGGACAG GTTGTGGTTA TCTTGGGACC TTCTGGTTCT
GGGAAATCAA CCCTTATCCG TACTATCAAT GCTTTGGAAC CAATCGACGA GGGTACCCTG
ATCGTTAACG GACATAATGT TACTGAGGCA TCTGCTAAGG ACTTGGTAGA ATTGCGTAAG
GAAGTAGGTA TGGTCTTCCA ACACTTCAAC CTCTACCCTC ACAAAACCGT TCTTGAAAAT
GTAACCTTAG CACCAATCAA GGTTCTCGGA ATTAGTAAGG CAGAGGCGGA GAAGACAGCT
GAAAAATTCC TTCGCTACGT TAACATGTGG GACAAGAAAG ATTCTTATCC TAGTATGCTT
TCTGGTGGGC AAAAACAACG TGTCGCCATC GCTCGTGGTC TTGCCATGAA ACCTGAACTT
TTGCTTTTTG ACGAACCGAC ATCAGCTCTT GACCCAGAGG CTATCGGTGA TGTTCTTGCT
GTTATGCAAA AACTTGCCAA AGGTGGTATG AACATGGTAG TTGTTACCCA CGAAATGGGC
TTTGCTCGTA GTGTGGCTGA CCGTATCATT TTCATGGCTG AAGGTCAGGT CCTTGTAGAC
ACTACGGATG TCGATGGCTT CTTCGACAAT CCAACTGAAC CTCGTGCAGC TAAGTTCCTC
TCTAATATTA TCAACCACCA CTCTGATAAA GTCTCAGTGG ATGCCTAA
|
|---|
| Protein sequence | MALIEFKNVN KYYGDYHALR DINLEIEKGQ VVVILGPSGS GKSTLIRTIN ALEPIDEGTL
IVNGHNVTEA SAKDLVELRK EVGMVFQHFN LYPHKTVLEN VTLAPIKVLG ISKAEAEKTA
EKFLRYVNMW DKKDSYPSML SGGQKQRVAI ARGLAMKPEL LLFDEPTSAL DPEAIGDVLA
VMQKLAKGGM NMVVVTHEMG FARSVADRII FMAEGQVLVD TTDVDGFFDN PTEPRAAKFL
SNIINHHSDK VSVDA
|
|---|
| |