Gene STER_1115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_1115 
Symbol 
ID4437349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand
Start bp1029796 
End bp1031136 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content38% 
IMG OID639676750 
Productsensor histidine kinase 
Protein accessionYP_820504 
Protein GI116627885 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAGTA TTGGCTTAAA TATTACAAGC TTTGAACTAG CCTTACTCTT TACGCTCCTC 
TTTGTTGCTT TCTATTTCAT TTTTCTAGCT TATCGTGATT ATCAACAGGT CAAAAATATC
CGAAAGTTGA CTAAGAGAGT CAAATCCCTT ATGGCAGGTA ATTATAATGA AAAATTACGC
ATAAAGGGAG ATTCAGAGCT TTTAGAGCTA GCTAATAGCT TGAATGATTT GTCGGACGTC
TTTCGTTTGA CACATGAAAA TCTAATCCAG GAAAAAAACC GCTTATCATC TGTTCTTTCG
TACATGAGTG ACGGGGTTAT TGCGACCAAT CGCCTTGGTC AGATTACTAT GATTAATAGT
ACTGCCCAAC GCTTGTTGAA TTTAGATCGC GAAACTGCGA CTCAGATGTC TATTTTGGAT
ATATTAGATG GTGAGAATCC CTATACCTAT AGTGAATTGT TGTCTAAGAC ACCCGAAATC
CATCTGTCGC GTCGAGATGC TAACGATGAA TTTGTGACGC TACGTGTTAA TTTTGCATTA
ATTCGTAAGG AATCTGGTTT TATTTCAGGT CTGGTAGCCG TTCTTCATGA TGCCACTGAG
CAGGAAAAAG AAGAGCGCGA ACGCCGTCTC TTCGTATCAA ATGTTAGTCA CGAATTGCGG
ACGCCTTTAA CTTCTGTGAA ATCCTATCTT GAAGCGCTTG ATGATGGTGC TCTCAACGAA
GAGATTGCTC CAAACTTTAT CAAAGTTTCT TTAGATGAAA CCAACCGCAT GATGCGTATG
ATTTCTGACC TCTTGGCATT ATCTCGAATT GACAATAAAA GCACACAGCT TAATGTTGAA
ATGACAAACT TTACAGCCTT TATGACCTAT ATCTTGAATC GGTTTGGTCA AATTAAGAGT
CAAGAAACTA ATCCAGGTAA GTCTTATGAA ATCATTCGAG ATTACCCAGT AAACTCTATT
TGGGTGGAAA TTGATACTGA TAAGATGACC CAGGTCATAG ATAATATACT TAATAATGCC
ATCAAGTATT CTCCTGATGG TGGGAAAATT ACAGTATCTA TGAAAACGAC AGACACTCAG
TTGATTGTTT CTATTTCTGA CCAAGGTTTA GGAATTCCTA AAAAAGATTT ACCTCTGATT
TTTGACCGTT TTTACCGTGT TGATAAGGCC AGAAGTCGTG CTCAGGGTGG AACAGGACTT
GGCTTGTCCA TTGCAAAAGA AATTGTTAAA CAACATAATG GCTTCATTTG GGCTAAGAGT
GAGTATGGTA AGGGATCAAC TTTTACAATT GTGCTTCCAT ATGACCAGGA CGCAATGATG
GTCGATGAAT GGGAGATGTA G
 
Protein sequence
MTSIGLNITS FELALLFTLL FVAFYFIFLA YRDYQQVKNI RKLTKRVKSL MAGNYNEKLR 
IKGDSELLEL ANSLNDLSDV FRLTHENLIQ EKNRLSSVLS YMSDGVIATN RLGQITMINS
TAQRLLNLDR ETATQMSILD ILDGENPYTY SELLSKTPEI HLSRRDANDE FVTLRVNFAL
IRKESGFISG LVAVLHDATE QEKEERERRL FVSNVSHELR TPLTSVKSYL EALDDGALNE
EIAPNFIKVS LDETNRMMRM ISDLLALSRI DNKSTQLNVE MTNFTAFMTY ILNRFGQIKS
QETNPGKSYE IIRDYPVNSI WVEIDTDKMT QVIDNILNNA IKYSPDGGKI TVSMKTTDTQ
LIVSISDQGL GIPKKDLPLI FDRFYRVDKA RSRAQGGTGL GLSIAKEIVK QHNGFIWAKS
EYGKGSTFTI VLPYDQDAMM VDEWEM