Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_1005 |
Symbol | |
ID | 4438462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | + |
Start bp | 926207 |
End bp | 927517 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639676657 |
Product | rRNA methyltransferase, putative |
Protein accession | YP_820411 |
Protein GI | 116627792 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
TIGRFAM ID | [TIGR00446] NOL1/NOP2/sun family putative RNA methylase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00439767 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTC CATCAGATTT TATAGAAAAA TATAAAGACT TACTTGGTGC TGAAGCGGAG GAATTCTTTA CATCTTTTGA TCAAGAAGCT GTGTCTGCCT ACCGCATTAA CCCTCTTAAA AAGCAGCAGA AGGACTATCC TGATCCTATT CCTGGAACAC CTTGGGGCCA TTACGGTAAA ATTTCAGGAA AATCTTCTGA CCACGCGACT GGTTTAGTTT ATTCTCAAGA ACCAGCTGCT CAAATGGTTG CTCAAGTGGC AGCTCCATCA AAAGGAAGCC GTGTTCTAGA CTTAGCCGCA GCACCAGGCG GAAAATCCAC GCATCTCCTA AGCTATCTGG ATAACACAGG TTTACTCGTC AGCAACGAAA TCAATTTCAA ACGTAGCAAG GTTCTAGTTG AGAATATTGA GCGATTTGGT GCTAAAAATG TTGTTGTGAC TAATACGTCA GCTGATAAAC TAGCCAAAGT TTTTAAAAAT TATTTTGATA TGATTGTCTT TGATGGACCA TGTTCTGGAG AAGGAATGTT TCGCAAGGAC CCTGATGCAA TCCAGTATTG GCACAAGGAC TATCCTAGTG AACTGGCACA ATTGCAGAAG GACATCCTAG CAGATGGTTT GAAGATGTTA GCCCCAGGAG GACAATTAGT TTACTCAACA TGTACCTGGT CTCCTGAGGA AAATGAAGGT GTTGTTGCTT GGATTTTAGA GAATTACCCT GACCTTGAAT TGGTGGCAAT CCCTAAATTG AACGGGATGA GCGATGGGAT TGATTTTCCA GAAACAACTC GAATGTATCC ACACCATTTC AAGGGGGAAG GTCAGTTTGT GGCAAAATTC CAGGATAAGC GCATGCCTGA GCAGTCATGC ATCAAAGAGG GGAAAACAAA CCTCAATAAG GAGCAAAAAC AGCTCTGGGA TGATTTTGTT AAAAAACACC TCAAGCTACC TCTAGACGGT TTACTACAAG TCTTTGGCGA CAACCTCTAT CTACTTCCTA GGGGACTACC AGATCTTTCC AAAGTTAAAA TCGCACGCAA TGGCTTGCAT CTTGGCATCT TCAAGAAAAA ACGTTTTGAG CCAAGTTTTG CACTTGGAAT TGCTTTAACA TCGGATGAAG TAGTCTCAAG TATAGAGTTA ACTCAAGAAC AATTTGCACA GTATGCCTCT GGTAATGTGG TTACACTTGA CCAAACGTTA GAAAACGGTT GGTATCAACT TTTGGTAGAT GGTAATGGAT TTGGCTTTGC TAAGGTTATT GGAAATACTT TAAAAAACTA CTATCCTAAG GGTTTAAGAT TCCATATTTG A
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Protein sequence | MKFPSDFIEK YKDLLGAEAE EFFTSFDQEA VSAYRINPLK KQQKDYPDPI PGTPWGHYGK ISGKSSDHAT GLVYSQEPAA QMVAQVAAPS KGSRVLDLAA APGGKSTHLL SYLDNTGLLV SNEINFKRSK VLVENIERFG AKNVVVTNTS ADKLAKVFKN YFDMIVFDGP CSGEGMFRKD PDAIQYWHKD YPSELAQLQK DILADGLKML APGGQLVYST CTWSPEENEG VVAWILENYP DLELVAIPKL NGMSDGIDFP ETTRMYPHHF KGEGQFVAKF QDKRMPEQSC IKEGKTNLNK EQKQLWDDFV KKHLKLPLDG LLQVFGDNLY LLPRGLPDLS KVKIARNGLH LGIFKKKRFE PSFALGIALT SDEVVSSIEL TQEQFAQYAS GNVVTLDQTL ENGWYQLLVD GNGFGFAKVI GNTLKNYYPK GLRFHI
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