| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_0880 |
|---|
| Symbol | |
|---|
| ID | 4437152 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | + |
|---|
| Start bp | 810319 |
|---|
| End bp | 810519 |
|---|
| Gene Length | 201 bp |
|---|
| Protein Length | 66 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 639676558 |
|---|
| Product | cold shock protein |
|---|
| Protein accession | YP_820312 |
|---|
| Protein GI | 116627693 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1278] Cold shock proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000035682 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAATG GAACAGTAAA ATGGTTTAAC GCTACTAAAG GATTTGGTTT TATTACCTCT
GAAGATGGTC AAGATTTGTT CGCTCACTTC TCATCAATTC AATCTGATGG ATTCAAATCA
CTTGACGAAG ATCAAAAAGT TGAATTTGAT GTTGAAGTAG GTCAACGTGG ACCTCAAGCA
GTTAATATCA CAAAAGCATA A
|
|---|
| Protein sequence | MANGTVKWFN ATKGFGFITS EDGQDLFAHF SSIQSDGFKS LDEDQKVEFD VEVGQRGPQA
VNITKA
|
|---|
| |