Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_0675 |
Symbol | smpB |
ID | 4437258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | + |
Start bp | 612153 |
End bp | 612617 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639676376 |
Product | SsrA-binding protein |
Protein accession | YP_820130 |
Protein GI | 116627511 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0691] tmRNA-binding protein |
TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00171749 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAAAAG GTGAAGGCAA TGTTGTTGCT CAGAATAAAA AGGCGAGACA TGACTATAGT ATTGTAGATA CTATTGAAGC GGGTATCGTG CTGACAGGGA CAGAGATTAA GTCTGTTCGT GCGGCTCGCA TCCAGCTAAA GGATGGTTAC GCCCAAATAA AAAACGGGGA AGCTTGGTTA ATCAATGTTC ATATTGCTCC TTTTGAGCAA GGGAACATCT GGAATCAAGA TCCAGAACGT ACTCGGAAAT TATTGCTCAA GAAAAAGCAA ATCACCAAAC TTCAAAATGA TCTTAAAGGA ACAGGGATGA CCTTAGTCCC ACTTAAGGTT TACCTAAAAA ATGGTTTTGC CAAGGTTCTA CTGGGTATCG CCAAAGGGAA GCACGATTAC GATAAACGTG AGTCAATCAA ACGTCGCGAA CAAGAGCGTG ACATTAAACG TATTATCAAG AGTGTTAACC GTTAA
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Protein sequence | MPKGEGNVVA QNKKARHDYS IVDTIEAGIV LTGTEIKSVR AARIQLKDGY AQIKNGEAWL INVHIAPFEQ GNIWNQDPER TRKLLLKKKQ ITKLQNDLKG TGMTLVPLKV YLKNGFAKVL LGIAKGKHDY DKRESIKRRE QERDIKRIIK SVNR
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