| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_0554 |
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| Symbol | |
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| ID | 4437075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptococcus thermophilus LMD-9 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008532 |
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| Strand | + |
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| Start bp | 498702 |
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| End bp | 499592 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639676268 |
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| Product | ribosomal large subunit pseudouridine synthase D |
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| Protein accession | YP_820025 |
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| Protein GI | 116627406 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0069072 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGTCA TCATTAAAGA GGCGGGAAAC CGTCTGGACA AGTCTTTGGC CGATTTGACA
GAATTGTCAC GTAGTCAGGC CAATGAAGCG ATTAAGGCTG GAACAGTATT AGTCAATGGT
AAGTTGGCCA AGGCTAAGTA TGTGGTAAAA GAGGGTGATG TCATCACCTA TGTATTGCCT
GAAGAAGAGG TCTTGGAATA CAAGGCTGAA GATATTCCTT TGGATATTAT CTACGAGGAT
GCGGATGTGG CAGTGGTCAA CAAACCTCAA GGTATAGTGG TCCATCCATC AGCTGGCCAC
ACATCTGGCA CCTTGGTCAA TGCTCTTATG TACCATGTCA AGGACCTTTC GTCTATCAAT
GGCGTGGTTC GTCCTGGGAT TGTTCACCGT ATCGATAAGG ACACGTCTGG TCTCCTTATG
ATTGCTAAGA ATGATAAGGC CCACAATGCT TTGGCAGCTG AGCTTAAGGA TAAGAAGTCG
CTTCGCAAGT ATGTGGCTAT CGTGCATGGC AATCTGCCTA ACGATAGAGG TGTGATTGAG
GCTCCGATTG GGCGTTCGGA CAAAGACCGT AAGAAACAGG CAGTAACAGC TAAGGGAAAG
CCTGCAGTAA CACGCTTCAC CGTTCTTGAA CGTTTTGGCA ACTATACGTT GGTAGAGTTG
CAGCTGGAAA CAGGTCGTAC CCACCAGATT CGTGTGCACA TGGCGTATAT TGGTCACCCG
GTGGCGGGAG ATCCTCTTTA TGGGCCACGC AAGACCCTCA AGGGCCATGG ACAATTTCTA
CATGCTAAGA CCCTTGGTTT CACGCATCCT ACGACAGGCG AATTGGTCGA ATTTACCGCA
GAAGAACCCA TTATTTTCAA GGAGACCTTG GAGAAATTGA GGAAAGCTTA A
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| Protein sequence | MEVIIKEAGN RLDKSLADLT ELSRSQANEA IKAGTVLVNG KLAKAKYVVK EGDVITYVLP
EEEVLEYKAE DIPLDIIYED ADVAVVNKPQ GIVVHPSAGH TSGTLVNALM YHVKDLSSIN
GVVRPGIVHR IDKDTSGLLM IAKNDKAHNA LAAELKDKKS LRKYVAIVHG NLPNDRGVIE
APIGRSDKDR KKQAVTAKGK PAVTRFTVLE RFGNYTLVEL QLETGRTHQI RVHMAYIGHP
VAGDPLYGPR KTLKGHGQFL HAKTLGFTHP TTGELVEFTA EEPIIFKETL EKLRKA
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